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  5. PSME_00035306-RA

PSME_00035306-RA


Description : (at5g57620 : 246.0) Encodes a putative transcription factor (MYB36).; myb domain protein 36 (MYB36); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 9119 Blast hits to 8411 proteins in 472 species: Archae - 0; Bacteria - 0; Metazoa - 823; Fungi - 478; Plants - 5914; Viruses - 3; Other Eukaryotes - 1901 (source: NCBI BLink). & (q7xbh4|myb4_orysa : 168.0) Myb-related protein Myb4 (OsMyb4) (Transcription factor RLTR1) - Oryza sativa (Rice) & (reliability: 492.0) & (original description: no original description)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00035306-RA
Cluster HCCA clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Bradi3g52260 No alias myb domain protein 58 0.02 Orthogroups_2024-Update
Bradi5g20130 No alias myb domain protein 63 0.03 Orthogroups_2024-Update
GRMZM2G139688 No alias myb domain protein 65 0.02 Orthogroups_2024-Update
PSME_00018833-RA No alias (p20025|myb38_maize : 246.0) Myb-related protein Zm38 -... 0.04 Orthogroups_2024-Update
PSME_00021355-RA No alias "(at2g47460 : 196.0) ""MYB12 belongs to subgroup 7 of... 0.03 Orthogroups_2024-Update
PSME_00045448-RA No alias (at4g38620 : 253.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
PSME_00051333-RA No alias (at1g68320 : 167.0) putative transcription factor:... 0.04 Orthogroups_2024-Update
PSME_00052005-RA No alias (at3g02940 : 213.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
PSME_00052727-RA No alias (p10290|mybc_maize : 194.0) Anthocyanin regulatory C1... 0.04 Orthogroups_2024-Update
Sobic.004G248700.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030410 nicotianamine synthase activity IEP Predicted GO
BP GO:0030417 nicotianamine metabolic process IEP Predicted GO
BP GO:0030418 nicotianamine biosynthetic process IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0072351 tricarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 69 111
IPR001005 SANT/Myb 14 62
No external refs found!