1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00035383-RA

PSME_00035383-RA


Description : (at5g43830 : 273.0) Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT3G22850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p24805|tsjt1_tobac : 115.0) Stem-specific protein TSJT1 - Nicotiana tabacum (Common tobacco) & (reliability: 546.0) & (original description: no original description)


Gene families : OG_42_0000532 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00035383-RA
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
227818 No alias Aluminium induced protein with YGL and LRDR motifs 0.03 Orthogroups_2024-Update
270383 No alias Aluminium induced protein with YGL and LRDR motifs 0.02 Orthogroups_2024-Update
A4A49_30744 No alias stem-specific protein tsjt1 0.03 Orthogroups_2024-Update
At4g27450 No alias AT4g27450/F27G19_50 [Source:UniProtKB/TrEMBL;Acc:Q93V62] 0.04 Orthogroups_2024-Update
Bradi4g42890 No alias Aluminium induced protein with YGL and LRDR motifs 0.02 Orthogroups_2024-Update
Bradi5g26320 No alias Aluminium induced protein with YGL and LRDR motifs 0.02 Orthogroups_2024-Update
Brara.A03135.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.E02595.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Brara.F00154.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Brara.H01516.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G133023 No alias Aluminium induced protein with YGL and LRDR motifs 0.03 Orthogroups_2024-Update
Glyma.04G180700 No alias Aluminium induced protein with YGL and LRDR motifs 0.03 Orthogroups_2024-Update
Glyma.12G150500 No alias Aluminium induced protein with YGL and LRDR motifs 0.05 Orthogroups_2024-Update
Glyma.12G222400 No alias Aluminium induced protein with YGL and LRDR motifs 0.04 Orthogroups_2024-Update
Glyma.13G240300 No alias Aluminium induced protein with YGL and LRDR motifs 0.04 Orthogroups_2024-Update
Glyma.15G072400 No alias Aluminium induced protein with YGL and LRDR motifs 0.04 Orthogroups_2024-Update
Glyma.15G105100 No alias Aluminium induced protein with YGL and LRDR motifs 0.03 Orthogroups_2024-Update
HORVU2Hr1G118550.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G094370.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Pp1s257_73V6 No alias F5N5.2; expressed protein [Arabidopsis thaliana] 0.06 Orthogroups_2024-Update
Seita.7G323100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G269200.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR024286 DUF3700 94 254
IPR024286 DUF3700 2 69
No external refs found!