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  5. PSME_00035542-RA

PSME_00035542-RA


Description : (q7f2l3|nac48_orysa : 221.0) NAC domain-containing protein 48 (ONAC048) - Oryza sativa (Rice) & (at1g01720 : 219.0) Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.; ATAF1; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 32 (TAIR:AT1G77450.1); Has 3043 Blast hits to 3037 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3043; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 438.0) & (original description: no original description)


Gene families : OG_42_0000084 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00035542-RA
Cluster HCCA clusters: Cluster_355

Target Alias Description ECC score Gene Family Method Actions
Brara.F00162.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.07G271100 No alias NAC domain containing protein 35 0.02 Orthogroups_2024-Update
PSME_00001411-RA No alias (at2g02450 : 278.0) NAC domain containing protein 35... 0.03 Orthogroups_2024-Update
PSME_00015911-RA No alias (at3g04070 : 259.0) NAC domain containing protein 47... 0.05 Orthogroups_2024-Update
PSME_00017655-RA No alias (at1g01720 : 236.0) Belongs to a large family of... 0.03 Orthogroups_2024-Update
PSME_00030259-RA No alias (q7f2l3|nac48_orysa : 263.0) NAC domain-containing... 0.05 Orthogroups_2024-Update
PSME_00042313-RA No alias (at1g52880 : 289.0) Transcription factor with a NAC... 0.03 Orthogroups_2024-Update
Potri.008G089000 No alias NAC-like, activated by AP3/PI 0.02 Orthogroups_2024-Update
Seita.7G306400.1 No alias NAC-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G094700.1 No alias NAC-type transcription factor 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003441 NAC-dom 36 162
No external refs found!