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  5. PSME_00035582-RA

PSME_00035582-RA


Description : (at1g69550 : 189.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 378.0) & (original description: no original description)


Gene families : OG_42_0000607 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00035582-RA
Cluster HCCA clusters: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
MA_10431491g0010 No alias (at1g69550 : 128.0) disease resistance protein... 0.04 Orthogroups_2024-Update
MA_10433406g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10433431g0020 No alias (at1g69550 : 123.0) disease resistance protein... 0.05 Orthogroups_2024-Update
MA_10434515g0010 No alias (at1g69550 : 251.0) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_10435970g0030 No alias (at1g69550 : 82.8) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_10436182g0010 No alias (at1g69550 : 237.0) disease resistance protein... 0.04 Orthogroups_2024-Update
MA_10437031g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_116648g0020 No alias (at1g69550 : 168.0) disease resistance protein... 0.05 Orthogroups_2024-Update
MA_6125650g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_6154g0010 No alias (at1g69550 : 104.0) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_913482g0010 No alias (at1g69550 : 85.9) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00003863-RA No alias (at2g14080 : 112.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00019336-RA No alias (at1g69550 : 183.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00025149-RA No alias (at1g69550 : 231.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00053796-RA No alias (at1g69550 : 180.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00055796-RA No alias (at1g69550 : 228.0) disease resistance protein... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
InterPro domains Description Start Stop
IPR026906 LRR_5 476 589
IPR001611 Leu-rich_rpt 163 185
No external refs found!