Description : (at5g05390 : 699.0) putative laccase, a member of laccase family of genes (17 members in Arabidopsis).; laccase 12 (LAC12); FUNCTIONS IN: laccase activity; INVOLVED IN: oxidation reduction, lignin catabolic process; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 5 (TAIR:AT2G40370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p14133|aso_cucsa : 196.0) L-ascorbate oxidase precursor (EC 1.10.3.3) (Ascorbase) (ASO) - Cucumis sativus (Cucumber) & (reliability: 1398.0) & (original description: no original description)
Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00035589-RA | |
Cluster | HCCA clusters: Cluster_20 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At2g30210 | No alias | Laccase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q56YT0] | 0.02 | Orthogroups_2024-Update | |
Bradi2g23350 | No alias | laccase 17 | 0.02 | Orthogroups_2024-Update | |
Bradi3g59177 | No alias | laccase 14 | 0.02 | Orthogroups_2024-Update | |
Brara.J01366.1 | No alias | lignin laccase & EC_1.10 oxidoreductase acting on... | 0.03 | Orthogroups_2024-Update | |
Glyma.14G198900 | No alias | laccase 3 | 0.03 | Orthogroups_2024-Update | |
Glyma.18G023600 | No alias | laccase 5 | 0.02 | Orthogroups_2024-Update | |
PSME_00001502-RA | No alias | (at2g38080 : 615.0) Encodes a protein with similarity to... | 0.04 | Orthogroups_2024-Update | |
PSME_00007334-RA | No alias | (at5g05390 : 687.0) putative laccase, a member of... | 0.04 | Orthogroups_2024-Update | |
PSME_00010271-RA | No alias | (at5g05390 : 664.0) putative laccase, a member of... | 0.06 | Orthogroups_2024-Update | |
PSME_00014449-RA | No alias | (at5g60020 : 734.0) putative laccase, a member of... | 0.03 | Orthogroups_2024-Update | |
PSME_00015371-RA | No alias | (at5g05390 : 674.0) putative laccase, a member of... | 0.03 | Orthogroups_2024-Update | |
PSME_00026986-RA | No alias | (at5g05390 : 621.0) putative laccase, a member of... | 0.04 | Orthogroups_2024-Update | |
PSME_00027898-RA | No alias | (at5g05390 : 748.0) putative laccase, a member of... | 0.03 | Orthogroups_2024-Update | |
PSME_00028638-RA | No alias | (at5g05390 : 656.0) putative laccase, a member of... | 0.05 | Orthogroups_2024-Update | |
PSME_00030810-RA | No alias | (at5g05390 : 572.0) putative laccase, a member of... | 0.04 | Orthogroups_2024-Update | |
PSME_00031239-RA | No alias | (at1g18140 : 634.0) putative laccase, a member of... | 0.05 | Orthogroups_2024-Update | |
PSME_00033274-RA | No alias | (at5g03260 : 805.0) putative laccase, a member of... | 0.04 | Orthogroups_2024-Update | |
PSME_00039722-RA | No alias | (at5g05390 : 721.0) putative laccase, a member of... | 0.04 | Orthogroups_2024-Update | |
PSME_00042485-RA | No alias | (at5g05390 : 782.0) putative laccase, a member of... | 0.06 | Orthogroups_2024-Update | |
Sobic.008G090800.1 | No alias | EC_1.10 oxidoreductase acting on diphenol or related... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005507 | copper ion binding | IEA | InterProScan predictions |
MF | GO:0016491 | oxidoreductase activity | IEA | InterProScan predictions |
BP | GO:0055114 | oxidation-reduction process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0009690 | cytokinin metabolic process | IEP | Predicted GO |
BP | GO:0009767 | photosynthetic electron transport chain | IEP | Predicted GO |
BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | Predicted GO |
BP | GO:0010817 | regulation of hormone levels | IEP | Predicted GO |
MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
MF | GO:0019139 | cytokinin dehydrogenase activity | IEP | Predicted GO |
BP | GO:0019684 | photosynthesis, light reaction | IEP | Predicted GO |
MF | GO:0019842 | vitamin binding | IEP | Predicted GO |
BP | GO:0022900 | electron transport chain | IEP | Predicted GO |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
BP | GO:0034754 | cellular hormone metabolic process | IEP | Predicted GO |
BP | GO:0042445 | hormone metabolic process | IEP | Predicted GO |
CC | GO:0044427 | chromosomal part | IEP | Predicted GO |
MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
MF | GO:0070279 | vitamin B6 binding | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
No external refs found! |