1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00036064-RA

PSME_00036064-RA


Description : (at3g28460 : 127.0) methyltransferases; FUNCTIONS IN: methyltransferase activity; INVOLVED IN: rRNA methylation; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP00095 (InterPro:IPR004398); Has 4869 Blast hits to 4869 proteins in 1755 species: Archae - 2; Bacteria - 3296; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 1522 (source: NCBI BLink). & (reliability: 254.0) & (original description: no original description)


Gene families : OG_42_0005838 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005838_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00036064-RA
Cluster HCCA clusters: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
evm.model.tig00000269.115 No alias (at3g28460 : 87.4) methyltransferases; FUNCTIONS IN:... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!