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  5. PSME_00036092-RA

PSME_00036092-RA


Description : (at5g05690 : 582.0) Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in <i>bri1</i> mutant lines. CPD appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through a BRI1-mediated signaling pathway that affects FLC expression levels, as uncovered by double mutant analyses.; CONSTITUTIVE PHOTOMORPHOGENIC DWARF (CPD); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: in 9 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 90, subfamily D, polypeptide 1 (TAIR:AT3G13730.1); Has 33335 Blast hits to 33282 proteins in 1705 species: Archae - 54; Bacteria - 6996; Metazoa - 10729; Fungi - 6001; Plants - 7974; Viruses - 3; Other Eukaryotes - 1578 (source: NCBI BLink). & (q94iw5|c90d2_orysa : 332.0) Cytochrome P450 90D2 (EC 1.14.-.-) (C6-oxidase) - Oryza sativa (Rice) & (reliability: 1164.0) & (original description: no original description)


Gene families : OG_42_0000020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00036092-RA
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
130337 No alias cytochrome P450, family 716, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
444868 No alias cytochrome P450, family 716, subfamily A, polypeptide 1 0.02 Orthogroups_2024-Update
A4A49_15098 No alias beta-amyrin 28-oxidase 0.03 Orthogroups_2024-Update
A4A49_34730 No alias cytochrome p450 87a3 0.04 Orthogroups_2024-Update
Bradi1g15030 No alias brassinosteroid-6-oxidase 2 0.03 Orthogroups_2024-Update
Bradi1g51780 No alias ent-kaurenoic acid hydroxylase 2 0.02 Orthogroups_2024-Update
Bradi3g38150 No alias cytochrome P450, family 707, subfamily A, polypeptide 4 0.03 Orthogroups_2024-Update
Brara.E02273.1 No alias abscisic acid hydroxylase & EC_1.14 oxidoreductase... 0.03 Orthogroups_2024-Update
Glyma.16G109300 No alias cytochrome P450, family 707, subfamily A, polypeptide 1 0.02 Orthogroups_2024-Update
HORVU2Hr1G064640.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
HORVU4Hr1G032830.3 No alias 6-deoxocastasterone 6-oxidase *(BR6OX) & EC_1.14... 0.03 Orthogroups_2024-Update
HORVU5Hr1G043140.1 No alias steroid 3-dehydrogenase *(CPD) & EC_1.14 oxidoreductase... 0.03 Orthogroups_2024-Update
HORVU5Hr1G068330.2 No alias abscisic acid hydroxylase & EC_1.14 oxidoreductase... 0.03 Orthogroups_2024-Update
LOC_Os02g45280 No alias cytochrome P450, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g21260 No alias cytochrome P450 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g23180 No alias cytochrome P450, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g04480 No alias cytochrome P450, putative, expressed 0.04 Orthogroups_2024-Update
MA_295001g0010 No alias "(at5g45340 : 612.0) Encodes a protein with ABA... 0.04 Orthogroups_2024-Update
MA_607123g0010 No alias (q94iw5|c90d2_orysa : 121.0) Cytochrome P450 90D2 (EC... 0.03 Orthogroups_2024-Update
MA_8538790g0010 No alias "(at5g36110 : 204.0) member of CYP716A; ""cytochrome... 0.03 Orthogroups_2024-Update
Mp1g25410.1 No alias Ent-kaurenoic acid oxidase 1 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
PSME_00035721-RA No alias (at2g32440 : 539.0) ent-kaurenoic acid hydroxylase... 0.05 Orthogroups_2024-Update
PSME_00036524-RA No alias "(at5g45340 : 604.0) Encodes a protein with ABA... 0.03 Orthogroups_2024-Update
Potri.001G270800 No alias cytochrome P450, family 87, subfamily A, polypeptide 2 0.03 Orthogroups_2024-Update
Potri.002G126100 No alias cytochrome P450, family 707, subfamily A, polypeptide 4 0.04 Orthogroups_2024-Update
Potri.004G017800 No alias cytochrome P450, family 716, subfamily A, polypeptide 1 0.02 Orthogroups_2024-Update
Potri.005G124000 No alias Cytochrome P450 superfamily protein 0.03 Orthogroups_2024-Update
Pp1s56_61V6 No alias cytochrome p450 0.02 Orthogroups_2024-Update
Seita.2G334100.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Seita.8G027000.1 No alias steroid 3-dehydrogenase *(CPD) & EC_1.14 oxidoreductase... 0.05 Orthogroups_2024-Update
Sobic.001G022700.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Solyc03g019870 No alias Cytochrome P450 family protein (AHRD V3.3 *** U5FM31_POPTR) 0.02 Orthogroups_2024-Update
Sopen02g018730 No alias Cytochrome P450 0.03 Orthogroups_2024-Update
Sopen06g017700 No alias Cytochrome P450 0.02 Orthogroups_2024-Update
Sopen07g032650 No alias Cytochrome P450 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004146 dihydrofolate reductase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0046653 tetrahydrofolate metabolic process IEP Predicted GO
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 42 461
No external refs found!