1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00036314-RA

PSME_00036314-RA


Description : (q03666|gstx4_tobac : 228.0) Probable glutathione S-transferase (EC 2.5.1.18) (Auxin-induced protein PCNT107) - Nicotiana tabacum (Common tobacco) & (at1g78370 : 218.0) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).; glutathione S-transferase TAU 20 (GSTU20); FUNCTIONS IN: glutathione transferase activity; INVOLVED IN: toxin catabolic process; LOCATED IN: apoplast, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase TAU 19 (TAIR:AT1G78380.1); Has 7354 Blast hits to 7257 proteins in 1180 species: Archae - 0; Bacteria - 3234; Metazoa - 910; Fungi - 219; Plants - 2135; Viruses - 0; Other Eukaryotes - 856 (source: NCBI BLink). & (reliability: 436.0) & (original description: no original description)


Gene families : OG_42_0000012 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00036314-RA
Cluster HCCA clusters: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
122259 No alias glutathione S-transferase TAU 19 0.02 Orthogroups_2024-Update
A4A49_30841 No alias putative glutathione s-transferase 0.04 Orthogroups_2024-Update
At1g78340 No alias Glutathione S-transferase U22... 0.03 Orthogroups_2024-Update
At2g29420 No alias Glutathione S-transferase U7... 0.03 Orthogroups_2024-Update
Bradi2g41100 No alias glutathione S-transferase TAU 18 0.03 Orthogroups_2024-Update
Bradi3g31827 No alias Glutathione S-transferase family protein 0.04 Orthogroups_2024-Update
Brara.G02214.1 No alias class tau glutathione S-transferase 0.03 Orthogroups_2024-Update
HORVU0Hr1G019300.1 No alias class tau glutathione S-transferase 0.02 Orthogroups_2024-Update
HORVU7Hr1G083910.3 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00048_0430 kfl00048_0430_v1.1 (at1g78380 : 103.0) Encodes a glutathione transferase... 0.02 Orthogroups_2024-Update
LOC_Os09g20220 No alias glutathione S-transferase, putative, expressed 0.03 Orthogroups_2024-Update
MA_7614511g0010 No alias (q03666|gstx4_tobac : 155.0) Probable glutathione... 0.03 Orthogroups_2024-Update
PSME_00010241-RA No alias (at1g78370 : 234.0) Encodes glutathione transferase... 0.04 Orthogroups_2024-Update
PSME_00015234-RA No alias (at1g59700 : 201.0) Encodes glutathione transferase... 0.02 Orthogroups_2024-Update
PSME_00042278-RA No alias (at1g78370 : 231.0) Encodes glutathione transferase... 0.04 Orthogroups_2024-Update
PSME_00054538-RA No alias (at1g53680 : 125.0) Encodes glutathione transferase... 0.04 Orthogroups_2024-Update
Seita.2G033600.1 No alias class tau glutathione S-transferase 0.02 Orthogroups_2024-Update
Seita.5G453500.1 No alias class tau glutathione S-transferase 0.03 Orthogroups_2024-Update
Seita.9G157600.1 No alias class tau glutathione S-transferase 0.03 Orthogroups_2024-Update
Seita.9G345300.1 No alias class tau glutathione S-transferase 0.03 Orthogroups_2024-Update
Seita.9G347300.1 No alias class tau glutathione S-transferase 0.03 Orthogroups_2024-Update
Solyc09g011520 No alias Glutathione S-transferase-like protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc09g011630 No alias putative glutathione S-transferase T2 0.02 Orthogroups_2024-Update
Sopen01g032840 No alias Glutathione S-transferase, N-terminal domain 0.02 Orthogroups_2024-Update
Sopen07g029790 No alias Glutathione S-transferase, C-terminal domain 0.02 Orthogroups_2024-Update
Sopen07g029830 No alias Glutathione S-transferase, N-terminal domain 0.03 Orthogroups_2024-Update
Sopen07g029840 No alias Glutathione S-transferase, N-terminal domain 0.02 Orthogroups_2024-Update
Sopen09g006360 No alias Glutathione S-transferase, N-terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004045 Glutathione_S-Trfase_N 4 75
IPR004046 GST_C 120 200
No external refs found!