PSME_00036348-RA

Description : (at2g24130 : 481.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47570.1); Has 211952 Blast hits to 136025 proteins in 5092 species: Archae - 179; Bacteria - 23123; Metazoa - 70875; Fungi - 10647; Plants - 82602; Viruses - 325; Other Eukaryotes - 24201 (source: NCBI BLink). & (p93194|rpk1_iponi : 293.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 962.0) & (original description: no original description)

Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00036348-RA
Cluster	HCCA clusters: Cluster_154

Target	Alias	Description	ECC score	Gene Family Method
93690	No alias	Protein kinase superfamily protein	0.02	Orthogroups_2024-Update
Bradi1g47130	No alias	Leucine-rich receptor-like protein kinase family protein	0.04	Orthogroups_2024-Update
Brara.E02261.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.02	Orthogroups_2024-Update
Brara.J01572.1	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
GRMZM2G322348	No alias	Leucine-rich repeat protein kinase family protein	0.02	Orthogroups_2024-Update
HORVU5Hr1G095120.2	No alias	LRR-XII protein kinase & EC_2.7 transferase transferring...	0.03	Orthogroups_2024-Update
LOC_Os01g33950	No alias	expressed protein	0.02	Orthogroups_2024-Update
MA_10237903g0010	No alias	(at3g47570 : 172.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
MA_10428901g0010	No alias	(at2g24130 : 511.0) Leucine-rich receptor-like protein...	0.04	Orthogroups_2024-Update
MA_10433224g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_125058g0020	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_159836g0010	No alias	(at2g24130 : 563.0) Leucine-rich receptor-like protein...	0.03	Orthogroups_2024-Update
MA_805205g0020	No alias	(at2g24130 : 159.0) Leucine-rich receptor-like protein...	0.03	Orthogroups_2024-Update
MA_8334663g0010	No alias	(at5g20480 : 141.0) Encodes a predicted leucine-rich...	0.03	Orthogroups_2024-Update
MA_8708888g0010	No alias	(at1g25320 : 155.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00009451-RA	No alias	(at5g46330 : 647.0) Encodes a leucine-rich repeat...	0.04	Orthogroups_2024-Update
PSME_00014024-RA	No alias	(at2g24130 : 458.0) Leucine-rich receptor-like protein...	0.05	Orthogroups_2024-Update
PSME_00014185-RA	No alias	(at3g24240 : 256.0) Leucine-rich repeat receptor-like...	0.05	Orthogroups_2024-Update
PSME_00016740-RA	No alias	(at4g20140 : 524.0) Encodes GASSHO1 (GSO1), a putative...	0.04	Orthogroups_2024-Update
PSME_00019141-RA	No alias	(at3g51740 : 96.7) encodes a leucine-repeat receptor...	0.05	Orthogroups_2024-Update
PSME_00020006-RA	No alias	(at5g44700 : 633.0) Encodes GASSHO2 (GSO2), a putative...	0.04	Orthogroups_2024-Update
PSME_00027031-RA	No alias	(at3g47570 : 470.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00032507-RA	No alias	(at5g46330 : 369.0) Encodes a leucine-rich repeat...	0.04	Orthogroups_2024-Update
PSME_00035635-RA	No alias	(at3g47110 : 648.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00039997-RA	No alias	(at2g24130 : 449.0) Leucine-rich receptor-like protein...	0.03	Orthogroups_2024-Update
PSME_00040826-RA	No alias	(at5g63930 : 192.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00042483-RA	No alias	(at3g47570 : 568.0) Leucine-rich repeat protein kinase...	0.03	Orthogroups_2024-Update
PSME_00043563-RA	No alias	(at5g46330 : 292.0) Encodes a leucine-rich repeat...	0.05	Orthogroups_2024-Update
PSME_00044948-RA	No alias	(at3g47110 : 644.0) Leucine-rich repeat protein kinase...	0.04	Orthogroups_2024-Update
PSME_00049305-RA	No alias	(at4g20140 : 432.0) Encodes GASSHO1 (GSO1), a putative...	0.04	Orthogroups_2024-Update
PSME_00050999-RA	No alias	(at5g46330 : 144.0) Encodes a leucine-rich repeat...	0.04	Orthogroups_2024-Update
PSME_00053319-RA	No alias	(at1g34110 : 361.0) Leucine-rich receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00054181-RA	No alias	(at2g24130 : 94.4) Leucine-rich receptor-like protein...	0.04	Orthogroups_2024-Update
PSME_00055531-RA	No alias	(at5g46330 : 107.0) Encodes a leucine-rich repeat...	0.05	Orthogroups_2024-Update
Seita.2G093900.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
Seita.5G106500.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.02	Orthogroups_2024-Update
Sobic.005G187700.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.05	Orthogroups_2024-Update
Solyc03g098400	No alias	Receptor-kinase, putative (AHRD V3.3 *** B9SUC9_RICCO)	0.03	Orthogroups_2024-Update
Solyc06g006020	No alias	Non-specific serine/threonine protein kinase (AHRD V3.3...	0.02	Orthogroups_2024-Update
Sopen06g002000	No alias	Leucine rich repeat	0.03	Orthogroups_2024-Update
Sopen07g002870	No alias	Leucine Rich repeats (2 copies)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002097	tRNA wobble base modification	IEP	Predicted GO
BP	GO:0002098	tRNA wobble uridine modification	IEP	Predicted GO
MF	GO:0003922	GMP synthase (glutamine-hydrolyzing) activity	IEP	Predicted GO
MF	GO:0004506	squalene monooxygenase activity	IEP	Predicted GO
BP	GO:0006177	GMP biosynthetic process	IEP	Predicted GO
BP	GO:0006400	tRNA modification	IEP	Predicted GO
MF	GO:0008092	cytoskeletal protein binding	IEP	Predicted GO
BP	GO:0009163	nucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0009451	RNA modification	IEP	Predicted GO
MF	GO:0015631	tubulin binding	IEP	Predicted GO
MF	GO:0016851	magnesium chelatase activity	IEP	Predicted GO
CC	GO:0033588	Elongator holoenzyme complex	IEP	Predicted GO
BP	GO:0042451	purine nucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0042455	ribonucleoside biosynthetic process	IEP	Predicted GO
MF	GO:0043015	gamma-tubulin binding	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO
BP	GO:0046037	GMP metabolic process	IEP	Predicted GO
BP	GO:0046129	purine ribonucleoside biosynthetic process	IEP	Predicted GO
MF	GO:0051002	ligase activity, forming nitrogen-metal bonds	IEP	Predicted GO
MF	GO:0051003	ligase activity, forming nitrogen-metal bonds, forming coordination complexes	IEP	Predicted GO
BP	GO:1901070	guanosine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	839	859
IPR001611	Leu-rich_rpt	911	933
IPR013210	LRR_N_plant-typ	497	537
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	144	425
IPR000719	Prot_kinase_dom	1123	1311

External Links

No external refs found!

PSME_00036348-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation