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  5. PSME_00036566-RA

PSME_00036566-RA


Description : (at3g53960 : 501.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G37900.1); Has 6025 Blast hits to 5886 proteins in 1158 species: Archae - 0; Bacteria - 2442; Metazoa - 501; Fungi - 426; Plants - 2213; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (reliability: 942.0) & (original description: no original description)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00036566-RA
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
411211 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
A4A49_20747 No alias protein nrt1 ptr family 8.3 0.03 Orthogroups_2024-Update
A4A49_21916 No alias protein nrt1 ptr family 6.4 0.02 Orthogroups_2024-Update
At1g72140 No alias Protein NRT1/ PTR FAMILY 5.12... 0.02 Orthogroups_2024-Update
Bradi3g33040 No alias nitrate transporter 1.1 0.03 Orthogroups_2024-Update
Bradi3g39040 No alias peptide transporter 2 0.02 Orthogroups_2024-Update
Bradi3g47010 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g01737 No alias Major facilitator superfamily protein 0.07 Orthogroups_2024-Update
Brara.F00873.1 No alias nitrate transceptor *(NRT1.1) & anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Brara.I03305.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
GRMZM2G001764 No alias peptide transporter 3 0.02 Orthogroups_2024-Update
GRMZM2G086496 No alias nitrate transporter 1.1 0.02 Orthogroups_2024-Update
GRMZM5G811593 No alias peptide transporter 2 0.03 Orthogroups_2024-Update
Glyma.04G256300 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G145900 No alias peptide transporter 1 0.03 Orthogroups_2024-Update
Glyma.10G005300 No alias peptide transporter 3 0.03 Orthogroups_2024-Update
Glyma.13G197500 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G064900 No alias peptide transporter 1 0.03 Orthogroups_2024-Update
Glyma.18G300400 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G206300 No alias peptide transporter 3 0.04 Orthogroups_2024-Update
HORVU6Hr1G067740.3 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
MA_135648g0010 No alias (at1g32450 : 667.0) Transmembrane nitrate transporter.... 0.04 Orthogroups_2024-Update
MA_54821g0010 No alias (at3g54140 : 359.0) Encodes a di- and tri-peptide... 0.05 Orthogroups_2024-Update
Potri.002G225500 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Potri.013G106600 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G055800 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Seita.5G396400.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Sobic.001G275500.2 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Sobic.004G193000.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Solyc10g024490 No alias Peptide transporter, putative (AHRD V3.3 *** B9S1I2_RICCO) 0.02 Orthogroups_2024-Update
Sopen10g034410 No alias POT family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 125 550
No external refs found!