1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00036619-RA

PSME_00036619-RA


Description : (p22337|stad_ricco : 446.0) Acyl-[acyl-carrier-protein] desaturase, chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACP desaturase) (Delta(9) stearoyl-acyl carrier protein desaturase) - Ricinus communis (Castor bean) & (at3g02630 : 436.0) Plant stearoyl-acyl-carrier-protein desaturase family protein; FUNCTIONS IN: acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding; INVOLVED IN: oxidation reduction, fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribonucleotide reductase-related (InterPro:IPR012348), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Fatty acid desaturase, type 2 (InterPro:IPR005067); BEST Arabidopsis thaliana protein match is: Plant stearoyl-acyl-carrier-protein desaturase family protein (TAIR:AT5G16240.1); Has 934 Blast hits to 926 proteins in 218 species: Archae - 0; Bacteria - 428; Metazoa - 2; Fungi - 0; Plants - 447; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink). & (reliability: 872.0) & (original description: no original description)


Gene families : OG_42_0000579 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00036619-RA
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Brara.C02219.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
HORVU2Hr1G012600.2 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
MA_57262g0010 No alias (p22337|stad_ricco : 558.0) Acyl-[acyl-carrier-protein]... 0.03 Orthogroups_2024-Update
PSME_00028344-RA No alias (p22337|stad_ricco : 280.0) Acyl-[acyl-carrier-protein]... 0.03 Orthogroups_2024-Update
PSME_00029057-RA No alias (p22337|stad_ricco : 518.0) Acyl-[acyl-carrier-protein]... 0.03 Orthogroups_2024-Update
Pp1s404_17V6 No alias stearoyl-acyl carrier protein desaturase 0.03 Orthogroups_2024-Update
Seita.5G402700.1 No alias delta-9 stearoyl-ACP desaturase *(AAD) & EC_1.14... 0.02 Orthogroups_2024-Update
Seita.9G361600.1 No alias delta-9 stearoyl-ACP desaturase *(AAD) & EC_1.14... 0.02 Orthogroups_2024-Update
Solyc06g054670 No alias Acyl-[acyl-carrier-protein] desaturase (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc06g059710 No alias Acyl-[acyl-carrier-protein] desaturase (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEA InterProScan predictions
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005067 Fatty_acid_desaturase-2 81 343
No external refs found!