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Description : (at5g57250 : 323.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G59900.1); Has 71706 Blast hits to 14592 proteins in 301 species: Archae - 6; Bacteria - 54; Metazoa - 648; Fungi - 890; Plants - 68117; Viruses - 0; Other Eukaryotes - 1991 (source: NCBI BLink). & (q76c99|rf1_orysa : 253.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 646.0) & (original description: no original description)
Gene families : OG_42_0006661 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006661_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00036682-RA | |
| Cluster | HCCA clusters: Cluster_688 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
| MF | GO:0008017 | microtubule binding | IEP | Predicted GO |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
| MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 124 | 172 |
| IPR002885 | Pentatricopeptide_repeat | 346 | 391 |
| IPR002885 | Pentatricopeptide_repeat | 193 | 241 |
| IPR002885 | Pentatricopeptide_repeat | 447 | 496 |
| IPR002885 | Pentatricopeptide_repeat | 263 | 314 |
| IPR002885 | Pentatricopeptide_repeat | 517 | 566 |
| IPR002885 | Pentatricopeptide_repeat | 634 | 670 |
| IPR002885 | Pentatricopeptide_repeat | 19 | 67 |
| IPR002885 | Pentatricopeptide_repeat | 315 | 340 |
| IPR002885 | Pentatricopeptide_repeat | 420 | 444 |
| IPR002885 | Pentatricopeptide_repeat | 583 | 609 |
| IPR002885 | Pentatricopeptide_repeat | 84 | 117 |
| No external refs found! |