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  5. PSME_00036753-RA

PSME_00036753-RA


Description : (at2g39050 : 128.0) hydroxyproline-rich glycoprotein family protein; CONTAINS InterPro DOMAIN/s: Ricin B-related lectin (InterPro:IPR008997), Ricin B lectin (InterPro:IPR000772); Has 1708 Blast hits to 1449 proteins in 222 species: Archae - 0; Bacteria - 47; Metazoa - 514; Fungi - 386; Plants - 615; Viruses - 5; Other Eukaryotes - 141 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description)


Gene families : OG_42_0001549 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001549_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00036753-RA
Cluster HCCA clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
Brara.C01995.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10435501g0030 No alias (at2g39050 : 165.0) hydroxyproline-rich glycoprotein... 0.04 Orthogroups_2024-Update
PSME_00003831-RA No alias (at2g39050 : 160.0) hydroxyproline-rich glycoprotein... 0.05 Orthogroups_2024-Update
Pp1s74_70V6 No alias T7F6.22; hydroxyproline-rich glycoprotein family protein... 0.02 Orthogroups_2024-Update
Sobic.002G420900.2 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!