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  5. PSME_00036873-RA

PSME_00036873-RA


Description : (at1g65730 : 901.0) Arabidopsis thaliana metal-nicotianamine transporter YSL4; YELLOW STRIPE like 7 (YSL7); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 5 (TAIR:AT3G17650.1); Has 1836 Blast hits to 1794 proteins in 556 species: Archae - 19; Bacteria - 893; Metazoa - 0; Fungi - 266; Plants - 510; Viruses - 1; Other Eukaryotes - 147 (source: NCBI BLink). & (reliability: 1626.0) & (original description: no original description)


Gene families : OG_42_0000320 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00036873-RA
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
At1g65730 No alias Probable metal-nicotianamine transporter YSL7... 0.03 Orthogroups_2024-Update
At3g17650 No alias Probable metal-nicotianamine transporter YSL5... 0.02 Orthogroups_2024-Update
Bradi5g17220 No alias YELLOW STRIPE like 3 0.02 Orthogroups_2024-Update
Bradi5g17230 No alias YELLOW STRIPE like 2 0.03 Orthogroups_2024-Update
Brara.H01665.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
LOC_Os02g43370 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
MA_10429029g0010 No alias (at5g53550 : 696.0) YELLOW STRIPE like 3 (YSL3);... 0.03 Orthogroups_2024-Update
PSME_00037955-RA No alias (at3g17650 : 686.0) Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Pp1s2_335V6 No alias oligopeptide transporter opt family 0.03 Orthogroups_2024-Update
Seita.1G244400.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
Seita.1G254200.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
Seita.7G172800.1 No alias iron chelator transporter *(YSL) & ferric... 0.04 Orthogroups_2024-Update
Seita.7G172900.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
Solyc03g031920 No alias Oligopeptide transporter, putative (AHRD V3.3 *** B9SIR4_RICCO) 0.02 Orthogroups_2024-Update
Solyc09g074960 No alias Yellow stripe 1A transporter (AHRD V3.3 *** A0A0K9P9K5_ZOSMR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 73 696
No external refs found!