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  5. Solyc02g070300

Solyc02g070300


Description : Protection of telomeres 1 protein (AHRD V3.3 *** B7T1K5_SOLTU)


Gene families : OG_42_0006746 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006746_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g070300
Cluster HCCA clusters: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
Bradi5g12880 No alias Nucleic acid-binding, OB-fold-like protein 0.02 Orthogroups_2024-Update
Sopen02g019390 No alias Telomeric single stranded DNA binding POT1/CDC13 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA InterProScan predictions
CC GO:0000784 nuclear chromosome, telomeric region IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0043047 single-stranded telomeric DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR032042 POT1PC 179 285
IPR011564 Telomer_end-bd_POT1/Cdc13 59 164
No external refs found!