1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00036930-RA

PSME_00036930-RA


Description : "(at5g23190 : 227.0) cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development.; ""cytochrome P450, family 86, subfamily B, polypeptide 1"" (CYP86B1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: very long-chain fatty acid biosynthetic process, suberin biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G08250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 454.0) & (original description: no original description)"


Gene families : OG_42_0000018 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00036930-RA

Target Alias Description ECC score Gene Family Method Actions
111270 No alias cytochrome P450, family 704, subfamily B, polypeptide 1 0.03 Orthogroups_2024-Update
124000 No alias cytochrome P450, family 86, subfamily B, polypeptide 1 0.05 Orthogroups_2024-Update
432651 No alias cytochrome P450, family 704, subfamily B, polypeptide 1 0.03 Orthogroups_2024-Update
83080 No alias cytochrome P450, family 94, subfamily D, polypeptide 2 0.02 Orthogroups_2024-Update
A4A49_02082 No alias cytochrome p450 94b1 0.02 Orthogroups_2024-Update
A4A49_04089 No alias cytochrome p450 94b1 0.04 Orthogroups_2024-Update
A4A49_09892 No alias cytochrome p450 94b1 0.02 Orthogroups_2024-Update
At1g13150 No alias Cytochrome P450, family 86, subfamily C, polypeptide 4... 0.03 Orthogroups_2024-Update
Brara.F03859.1 No alias mid-chain alkane hydroxylase *(MAH1) & EC_1.14... 0.04 Orthogroups_2024-Update
Brara.I03896.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
Glyma.03G008100 No alias cytochrome P450, family 86, subfamily A, polypeptide 8 0.02 Orthogroups_2024-Update
LOC_Os03g04640 No alias cytochrome P450 protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g03930 No alias cytochrome P450 86A1, putative, expressed 0.02 Orthogroups_2024-Update
MA_20526g0010 No alias "(at3g48520 : 405.0) member of CYP94B; ""cytochrome... 0.03 Orthogroups_2024-Update
MA_53309g0010 No alias "(at5g23190 : 442.0) cytochrome P450 CYP86B1, nuclear... 0.04 Orthogroups_2024-Update
PSME_00023193-RA No alias "(at3g56630 : 428.0) member of CYP94D; ""cytochrome... 0.05 Orthogroups_2024-Update
PSME_00027489-RA No alias "(at2g45510 : 418.0) member of CYP704A; ""cytochrome... 0.04 Orthogroups_2024-Update
PSME_00034567-RA No alias "(at5g23190 : 227.0) cytochrome P450 CYP86B1, nuclear... 0.03 Orthogroups_2024-Update
PSME_00044316-RA No alias "(at2g45510 : 430.0) member of CYP704A; ""cytochrome... 0.04 Orthogroups_2024-Update
PSME_00053361-RA No alias "(at1g63710 : 474.0) Encodes a member of the CYP86A... 0.04 Orthogroups_2024-Update
Potri.001G331100 No alias cytochrome P450, family 94, subfamily B, polypeptide 2 0.04 Orthogroups_2024-Update
Potri.001G397900 No alias cytochrome P450, family 96, subfamily A, polypeptide 10 0.02 Orthogroups_2024-Update
Potri.003G129100 No alias cytochrome P450, family 86, subfamily A, polypeptide 7 0.02 Orthogroups_2024-Update
Potri.008G125300 No alias cytochrome P450, family 96, subfamily A, polypeptide 10 0.04 Orthogroups_2024-Update
Potri.015G086900 No alias cytochrome P450, family 96, subfamily A, polypeptide 1 0.03 Orthogroups_2024-Update
Seita.5G386300.1 No alias fatty acyl omega-hydroxylase & EC_1.14 oxidoreductase... 0.03 Orthogroups_2024-Update
Seita.7G208300.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Solyc01g094120 No alias Cytochrome P450 family protein (AHRD V3.3 *** A0A061DTZ5_THECC) 0.02 Orthogroups_2024-Update
Solyc07g006890 No alias Cytochrome P450, putative (AHRD V3.3 *** B9S4U5_RICCO) 0.03 Orthogroups_2024-Update
Sopen02g038730 No alias Cytochrome P450 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 81 332
No external refs found!