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  5. PSME_00037099-RA

PSME_00037099-RA


Description : (at4g26090 : 230.0) Encodes a plasma membrane protein with leucine-rich repeat, leucine zipper, and P loop domains that confers resistance to Pseudomonas syringae infection by interacting with the avirulence gene avrRpt2. RPS2 protein interacts directly with plasma membrane associated protein RIN4 and this interaction is disrupted by avrRpt2.; RESISTANT TO P. SYRINGAE 2 (RPS2); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: RPS5-like 1 (TAIR:AT1G12210.1); Has 21906 Blast hits to 18242 proteins in 683 species: Archae - 18; Bacteria - 1169; Metazoa - 4701; Fungi - 258; Plants - 15223; Viruses - 0; Other Eukaryotes - 537 (source: NCBI BLink). & (reliability: 460.0) & (original description: no original description)


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00037099-RA
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
A4A49_01494 No alias putative disease resistance protein 0.03 Orthogroups_2024-Update
Bradi5g15560 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Brara.I05130.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g57870 No alias disease resistance protein RPS2, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g43440 No alias NB-ARC/LRR disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10059887g0010 No alias (at1g12220 : 207.0) Resistance gene, mediates resistance... 0.03 Orthogroups_2024-Update
MA_10062820g0010 No alias (at1g12280 : 143.0) LRR and NB-ARC domains-containing... 0.05 Orthogroups_2024-Update
MA_10435995g0040 No alias (at4g27190 : 188.0) NB-ARC domain-containing disease... 0.04 Orthogroups_2024-Update
MA_122523g0010 No alias (at1g12210 : 224.0) RFL1 has high sequence similarity to... 0.06 Orthogroups_2024-Update
MA_133928g0010 No alias (at1g12280 : 252.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
MA_23524g0010 No alias (at5g63020 : 197.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
MA_451961g0010 No alias (at1g12280 : 177.0) LRR and NB-ARC domains-containing... 0.03 Orthogroups_2024-Update
MA_5183807g0010 No alias (at4g10780 : 85.5) LRR and NB-ARC domains-containing... 0.04 Orthogroups_2024-Update
MA_549555g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_674039g0010 No alias (at5g63020 : 154.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
MA_8325275g0010 No alias (at1g12220 : 93.2) Resistance gene, mediates resistance... 0.03 Orthogroups_2024-Update
MA_8869735g0010 No alias (at1g61300 : 128.0) LRR and NB-ARC domains-containing... 0.06 Orthogroups_2024-Update
PSME_00004005-RA No alias (at1g15890 : 219.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00004922-RA No alias (at1g12280 : 266.0) LRR and NB-ARC domains-containing... 0.04 Orthogroups_2024-Update
PSME_00009853-RA No alias (at1g12280 : 271.0) LRR and NB-ARC domains-containing... 0.05 Orthogroups_2024-Update
PSME_00009855-RA No alias (at1g12280 : 248.0) LRR and NB-ARC domains-containing... 0.04 Orthogroups_2024-Update
PSME_00011110-RA No alias (at5g43740 : 165.0) Disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00018989-RA No alias (at4g26090 : 240.0) Encodes a plasma membrane protein... 0.06 Orthogroups_2024-Update
PSME_00027915-RA No alias (at1g15890 : 191.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00030472-RA No alias (at1g15890 : 234.0) Disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00034315-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00040363-RA No alias (at5g63020 : 222.0) Disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00050940-RA No alias (at1g12280 : 221.0) LRR and NB-ARC domains-containing... 0.05 Orthogroups_2024-Update
Potri.001G404800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Potri.019G002800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Solyc08g013970 No alias Disease resistance protein (AHRD V3.3 *** W9RZV6_9ROSA) 0.03 Orthogroups_2024-Update
Sopen08g004810 No alias NB-ARC domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 170 413
No external refs found!