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  5. PSME_00037103-RA

PSME_00037103-RA


Description : (at3g13600 : 414.0) calmodulin-binding family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 2440 Blast hits to 1727 proteins in 273 species: Archae - 4; Bacteria - 163; Metazoa - 734; Fungi - 252; Plants - 308; Viruses - 55; Other Eukaryotes - 924 (source: NCBI BLink). & (reliability: 828.0) & (original description: no original description)


Gene families : OG_42_0000322 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000322_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00037103-RA
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
A4A49_19391 No alias iq domain-containing protein iqm4 0.03 Orthogroups_2024-Update
A4A49_30578 No alias iq domain-containing protein iqm4 0.09 Orthogroups_2024-Update
At4g33050 No alias calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050] 0.04 Orthogroups_2024-Update
Bradi2g41490 No alias calmodulin-binding family protein 0.03 Orthogroups_2024-Update
Brara.A00486.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H01282.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G054900 No alias calmodulin-binding family protein 0.05 Orthogroups_2024-Update
GRMZM5G880028 No alias calmodulin-binding family protein 0.03 Orthogroups_2024-Update
Glyma.13G105800 No alias calmodulin-binding family protein 0.03 Orthogroups_2024-Update
Glyma.13G152168 No alias IQ calmodulin-binding motif family protein 0.03 Orthogroups_2024-Update
Glyma.15G171000 No alias calmodulin-binding family protein 0.04 Orthogroups_2024-Update
Glyma.17G053600 No alias calmodulin-binding family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G028900.11 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G028140.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G028150.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os07g43970 No alias calmodulin-binding protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_50509g0010 No alias (at3g13600 : 466.0) calmodulin-binding family protein;... 0.04 Orthogroups_2024-Update
MA_52703g0010 No alias (at3g52870 : 208.0) IQ calmodulin-binding motif family... 0.07 Orthogroups_2024-Update
MA_63468g0010 No alias (at3g13600 : 380.0) calmodulin-binding family protein;... 0.04 Orthogroups_2024-Update
Potri.006G226400 No alias calmodulin-binding family protein 0.06 Orthogroups_2024-Update
Seita.3G121200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G206500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G323400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G032700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G389500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.J024600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G358200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G193800.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.009G072900.2 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.009G257100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc07g040710 No alias Calmodulin binding protein, putative (AHRD V3.3 *** B9RK85_RICCO) 0.03 Orthogroups_2024-Update
Sopen10g029260 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen12g003890 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 91 109
No external refs found!