1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00037105-RA

PSME_00037105-RA


Description : (at5g03540 : 184.0) AtEXO70A1 is a member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into nine clusters on the phylogenetic tree; exocyst subunit exo70 family protein A1 (EXO70A1); CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein A2 (TAIR:AT5G52340.1). & (reliability: 368.0) & (original description: no original description)


Gene families : OG_42_0000104 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00037105-RA

Target Alias Description ECC score Gene Family Method Actions
A4A49_28238 No alias exocyst complex component exo70a1 0.01 Orthogroups_2024-Update
At3g55150 No alias Exocyst complex component EXO70H1... 0.02 Orthogroups_2024-Update
Brara.B01536.1 No alias component *(EXO70) of Exocyst complex 0.03 Orthogroups_2024-Update
Brara.C00596.1 No alias component *(EXO70) of Exocyst complex 0.01 Orthogroups_2024-Update
Brara.J01343.1 No alias component *(EXO70) of Exocyst complex 0.01 Orthogroups_2024-Update
Glyma.19G175200 No alias exocyst subunit exo70 family protein H4 0.07 Orthogroups_2024-Update
MA_106977g0010 No alias (at4g31540 : 333.0) A member of EXO70 gene family,... 0.03 Orthogroups_2024-Update
MA_12231g0010 No alias (at4g31540 : 265.0) A member of EXO70 gene family,... 0.06 Orthogroups_2024-Update
Potri.001G060700 No alias exocyst subunit exo70 family protein C1 0.01 Orthogroups_2024-Update
Potri.013G152900 No alias exocyst subunit exo70 family protein B1 0.01 Orthogroups_2024-Update
Potri.017G068000 No alias exocyst subunit exo70 family protein C2 0.02 Orthogroups_2024-Update
Potri.017G093700 No alias exocyst subunit exo70 family protein E1 0.01 Orthogroups_2024-Update
Solyc02g088800 No alias Exocyst subunit EXO70 family protein (AHRD V3.3 *** B9IK79_POPTR) 0.01 Orthogroups_2024-Update
Solyc11g073010 No alias LOW QUALITY:Exocyst subunit EXO70 family protein (AHRD... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!