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  5. PSME_00037269-RA

PSME_00037269-RA


Description : (at4g14630 : 236.0) germin-like protein with N-terminal signal sequence that may target it to the vacuole, plasma membrane and/or outside the cell.; germin-like protein 9 (GLP9); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity; INVOLVED IN: response to salt stress; LOCATED IN: extracellular region, plasma membrane, plant-type vacuole; EXPRESSED IN: stem, hypocotyl, sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), Germin (InterPro:IPR001929), RmlC-like jelly roll fold (InterPro:IPR014710), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: RmlC-like cupins superfamily protein (TAIR:AT5G39110.1); Has 1524 Blast hits to 1518 proteins in 95 species: Archae - 0; Bacteria - 12; Metazoa - 0; Fungi - 42; Plants - 1455; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (q9s8p4|rhre_pea : 226.0) Rhicadhesin receptor precursor (Germin-like protein) - Pisum sativum (Garden pea) & (reliability: 472.0) & (original description: no original description)


Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00037269-RA

Target Alias Description ECC score Gene Family Method Actions
Bradi4g06080 No alias germin-like protein 10 0.02 Orthogroups_2024-Update
Brara.B00896.1 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00044974-RA No alias (at5g39160 : 122.0) RmlC-like cupins superfamily... 0.04 Orthogroups_2024-Update
Pp1s86_31V6 No alias F14J9.22; germin-like protein (GLP4) (GLP5) [Arabidopsis... 0.02 Orthogroups_2024-Update
Sobic.004G165300.1 No alias Unknown function 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006045 Cupin_1 157 303
No external refs found!