1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00037345-RA

PSME_00037345-RA


Description : (p27880|hsp12_medsa : 206.0) 18.2 kDa class I heat shock protein - Medicago sativa (Alfalfa) & (at5g59720 : 203.0) encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.; heat shock protein 18.2 (HSP18.2); CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G53540.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 406.0) & (original description: no original description)


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00037345-RA
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
74961 No alias 17.6 kDa class II heat shock protein 0.02 Orthogroups_2024-Update
Brara.C00497.1 No alias class-C-II small heat-shock-responsive protein 0.05 Orthogroups_2024-Update
Glyma.04G208000 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
Glyma.14G099900 No alias 17.6 kDa class II heat shock protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G020500.1 No alias class-C-II small heat-shock-responsive protein 0.02 Orthogroups_2024-Update
Kfl00173_0020 kfl00173_0020_v1.1 (p12810|hsp11_wheat : 107.0) 16.9 kDa class I heat shock... 0.02 Orthogroups_2024-Update
MA_10433227g0010 No alias (p27397|hsp12_dauca : 204.0) 18.0 kDa class I heat shock... 0.03 Orthogroups_2024-Update
Mp7g07890.1 No alias 18.5 kDa class I heat shock protein OS=Glycine max... 0.02 Orthogroups_2024-Update
Mp7g10940.1 No alias 18.5 kDa class I heat shock protein OS=Glycine max... 0.02 Orthogroups_2024-Update
PSME_00051332-RA No alias (p24631|hsp21_maize : 114.0) 17.5 kDa class II heat... 0.02 Orthogroups_2024-Update
PSME_00054967-RA No alias (at1g54050 : 103.0) HSP20-like chaperones superfamily... 0.04 Orthogroups_2024-Update
Pp1s3_114V6 No alias 17.9 kDa class II heat shock protein [Helianthus annuus] 0.02 Orthogroups_2024-Update
Seita.9G458600.1 No alias class-C-I small heat-shock-responsive protein 0.04 Orthogroups_2024-Update
Sobic.001G426000.1 No alias class-C-I small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Sobic.004G026300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen03g032980 No alias Hsp20/alpha crystallin family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 100 203
No external refs found!