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PSME_00037530-RA


Description : (at2g33570 : 517.0) Domain of unknown function (DUF23); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF23 (InterPro:IPR008166); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF23) (TAIR:AT5G44670.1); Has 195 Blast hits to 195 proteins in 24 species: Archae - 2; Bacteria - 7; Metazoa - 43; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). & (reliability: 1034.0) & (original description: no original description)


Gene families : OG_42_0000862 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000862_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00037530-RA
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G093190.7 No alias beta-1,4-galactosyltransferase *(GALS) 0.02 Orthogroups_2024-Update
PSME_00025581-RA No alias (at2g33570 : 522.0) Domain of unknown function (DUF23);... 0.03 Orthogroups_2024-Update
PSME_00037529-RA No alias (at2g33570 : 522.0) Domain of unknown function (DUF23);... 0.02 Orthogroups_2024-Update
Seita.4G142300.1 No alias beta-1,4-galactosyltransferase *(GALS) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008166 Glyco_transf_92 668 886
IPR008166 Glyco_transf_92 239 461
No external refs found!