PSME_00037572-RA

Description : (at1g64000 : 105.0) member of WRKY Transcription Factor; Group II-c; WRKY DNA-binding protein 56 (WRKY56); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 24 (TAIR:AT5G41570.1); Has 3510 Blast hits to 3053 proteins in 190 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3491; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). & (reliability: 210.0) & (original description: no original description)

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00037572-RA
Cluster	HCCA clusters: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
At2g37260	No alias	WRKY transcription factor 44...	0.04	Orthogroups_2024-Update
Glyma.08G320200	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.09G029800	No alias	WRKY DNA-binding protein 14	0.03	Orthogroups_2024-Update
Glyma.14G006800	No alias	zinc-dependent activator protein-1	0.02	Orthogroups_2024-Update
HORVU1Hr1G051260.2	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
HORVU2Hr1G001780.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
HORVU5Hr1G096420.20	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
MA_14480g0020	No alias	(at1g62300 : 173.0) Encodes a transcription factor...	0.02	Orthogroups_2024-Update
MA_6943842g0010	No alias	(at3g58710 : 149.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
Pp1s135_80V6	No alias	wrky transcription	0.04	Orthogroups_2024-Update
Pp1s35_336V6	No alias	wrky transcription	0.02	Orthogroups_2024-Update
Seita.5G132700.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Seita.5G365500.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.009G034800.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sopen01g038890	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen07g025440	No alias	WRKY DNA -binding domain	0.05	Orthogroups_2024-Update
Sopen10g001650	No alias	WRKY DNA -binding domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006820	anion transport	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	125	182

External Links

No external refs found!

PSME_00037572-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation