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  5. PSME_00037850-RA

PSME_00037850-RA


Description : (at2g28660 : 97.1) Chloroplast-targeted copper chaperone protein; FUNCTIONS IN: copper ion binding, metal ion binding; INVOLVED IN: copper ion transport, metal ion transport; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), Copper chaperone, chloroplast-targeted, predicted (InterPro:IPR016578); BEST Arabidopsis thaliana protein match is: Chloroplast-targeted copper chaperone protein (TAIR:AT3G53530.1); Has 1827 Blast hits to 1203 proteins in 102 species: Archae - 0; Bacteria - 68; Metazoa - 145; Fungi - 15; Plants - 1082; Viruses - 0; Other Eukaryotes - 517 (source: NCBI BLink). & (reliability: 194.2) & (original description: no original description)


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00037850-RA
Cluster HCCA clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
A4A49_35643 No alias heavy metal-associated isoprenylated plant protein 21 0.02 Orthogroups_2024-Update
At5g17450 No alias Heavy metal-associated isoprenylated plant protein 21... 0.03 Orthogroups_2024-Update
Bradi1g62660 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g70700 No alias farnesylated protein 6 0.02 Orthogroups_2024-Update
Bradi4g26615 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G157900 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G257300 No alias Heavy metal transport/detoxification superfamily protein 0.04 Orthogroups_2024-Update
Glyma.09G120000 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G001000 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G072500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G114920.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G057730.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G112560.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G009000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g32330 No alias heavy metal-associated domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_923474g0010 No alias (at4g39700 : 135.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
Mp2g12480.1 No alias no hits & (original description: none) 0.01 Orthogroups_2024-Update
Potri.005G026100 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G132000 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Potri.019G106500 No alias Heavy metal transport/detoxification superfamily protein 0.03 Orthogroups_2024-Update
Pp1s57_17V6 No alias metal ion binding 0.02 Orthogroups_2024-Update
Seita.2G187200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G412400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G137900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc05g051820 No alias Heavy metal transport/detoxification superfamily protein... 0.03 Orthogroups_2024-Update
Sopen03g004600 No alias Heavy-metal-associated domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004000 adenosine deaminase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 106 158
No external refs found!