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  5. PSME_00037920-RA

PSME_00037920-RA


Description : (at2g39210 : 561.0) Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nodulin-like (InterPro:IPR010658), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G28120.1); Has 3072 Blast hits to 2927 proteins in 685 species: Archae - 32; Bacteria - 1223; Metazoa - 36; Fungi - 288; Plants - 601; Viruses - 0; Other Eukaryotes - 892 (source: NCBI BLink). & (reliability: 1122.0) & (original description: no original description)


Gene families : OG_42_0000169 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000169_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00037920-RA
Cluster HCCA clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Bradi1g12440 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G185600 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G069980.1 No alias UMF23-type solute transporter 0.02 Orthogroups_2024-Update
LOC_Os04g31924 No alias nodulin, putative, expressed 0.02 Orthogroups_2024-Update
MA_545504g0010 No alias (at2g39210 : 337.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
Mp3g06660.1 No alias anion transporter (Fabaceae-N70) 0.02 Orthogroups_2024-Update
Mp6g03460.1 No alias anion transporter (Fabaceae-N70) 0.02 Orthogroups_2024-Update
PSME_00046657-RA No alias (at2g39210 : 308.0) Major facilitator superfamily... 0.05 Orthogroups_2024-Update
PSME_00053941-RA No alias (at2g39210 : 466.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
Potri.002G133900 No alias Nodulin-like / Major Facilitator Superfamily protein 0.02 Orthogroups_2024-Update
Potri.004G215600 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Seita.8G228000.1 No alias UMF23-type solute transporter 0.03 Orthogroups_2024-Update
Solyc11g066330 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT2G28120.1) 0.02 Orthogroups_2024-Update
Sopen06g006820 No alias Nodulin-like 0.03 Orthogroups_2024-Update
Sopen10g033400 No alias Nodulin-like 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010658 Nodulin-like 17 264
No external refs found!