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  5. PSME_00037955-RA

PSME_00037955-RA


Description : (at3g17650 : 686.0) Arabidopsis thaliana metal-nicotianamine transporter YSL5; YELLOW STRIPE like 5 (YSL5); FUNCTIONS IN: oligopeptide transporter activity; INVOLVED IN: oligopeptide transport, transmembrane transport; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter OPT superfamily (InterPro:IPR004813); BEST Arabidopsis thaliana protein match is: YELLOW STRIPE like 8 (TAIR:AT1G48370.1); Has 1817 Blast hits to 1744 proteins in 553 species: Archae - 19; Bacteria - 918; Metazoa - 0; Fungi - 247; Plants - 486; Viruses - 1; Other Eukaryotes - 146 (source: NCBI BLink). & (reliability: 1290.0) & (original description: no original description)


Gene families : OG_42_0000320 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00037955-RA

Target Alias Description ECC score Gene Family Method Actions
At5g53550 No alias YSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178U7D6] 0.02 Orthogroups_2024-Update
HORVU2Hr1G070300.1 No alias iron chelator transporter *(YSL) & ferric... 0.05 Orthogroups_2024-Update
HORVU6Hr1G061450.4 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
PSME_00036873-RA No alias (at1g65730 : 901.0) Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Seita.1G254300.1 No alias iron chelator transporter *(YSL) & ferric... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004813 OPT 74 381
IPR004813 OPT 470 662
No external refs found!