- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : (at5g15640 : 134.0) Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrion, mitochondrial inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT1G72820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 268.0) & (original description: no original description)
Gene families : OG_42_0001006 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001006_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00037991-RA | |
| Cluster | HCCA clusters: Cluster_88 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi1g08301 | No alias | Mitochondrial substrate carrier family protein | 0.02 | Orthogroups_2024-Update | |
| LOC_Os01g22600 | No alias | mitochondrial carrier protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| Seita.5G156700.1 | No alias | solute transporter *(MTCC) | 0.03 | Orthogroups_2024-Update | |
| Sopen03g040740 | No alias | Mitochondrial carrier protein | 0.02 | Orthogroups_2024-Update | |
| Sopen12g031920 | No alias | Mitochondrial carrier protein | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000775 | chromosome, centromeric region | IEP | Predicted GO |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Predicted GO |
| MF | GO:0005516 | calmodulin binding | IEP | Predicted GO |
| BP | GO:0006801 | superoxide metabolic process | IEP | Predicted GO |
| BP | GO:0006855 | drug transmembrane transport | IEP | Predicted GO |
| BP | GO:0007059 | chromosome segregation | IEP | Predicted GO |
| BP | GO:0010167 | response to nitrate | IEP | Predicted GO |
| MF | GO:0015238 | drug transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015297 | antiporter activity | IEP | Predicted GO |
| BP | GO:0015706 | nitrate transport | IEP | Predicted GO |
| BP | GO:0015893 | drug transport | IEP | Predicted GO |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Predicted GO |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Predicted GO |
| BP | GO:0045132 | meiotic chromosome segregation | IEP | Predicted GO |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Predicted GO |
| CC | GO:0098687 | chromosomal region | IEP | Predicted GO |
| BP | GO:0098813 | nuclear chromosome segregation | IEP | Predicted GO |
| BP | GO:1901698 | response to nitrogen compound | IEP | Predicted GO |
| BP | GO:1903046 | meiotic cell cycle process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018108 | Mitochondrial_sb/sol_carrier | 1 | 67 |
| No external refs found! |