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- Pseudotsuga menziesii
- Sequence
- PSME_00038016-RA
PSME_00038016-RA
Description : "(at3g13730 : 293.0) Encodes a cytochrome P-450 gene that is involved in brassinosteroid biosynthesis, most likely in the conversion step of teasterone (TE) to 3-dehydroteasterone (3DT), and/or 6-deoxoteasterone (6-deoxoTE) to 6-deoxo-3-dehydroteasterone (6-deoxo3DT); or the conversion of cathasterone (CT) to TE, and/or 6-deoxocathasterone (6-deoxoCT) to 6-deoxoTE. Recently, CYP90D1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates). Member of the CYP90C CYP450 family. Similar to Cytochrome P450 90C1 (ROT3).; ""cytochrome P450, family 90, subfamily D, polypeptide 1"" (CYP90D1); FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen, oxygen binding; INVOLVED IN: stamen development, petal development, leaf development, brassinosteroid biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT4G36380.1); Has 27722 Blast hits to 27661 proteins in 1582 species: Archae - 80; Bacteria - 4717; Metazoa - 10119; Fungi - 4209; Plants - 7293; Viruses - 6; Other Eukaryotes - 1298 (source: NCBI BLink). & (q8gsq1|c85a1_orysa : 293.0) Cytochrome P450 85A1 (EC 1.14.-.-) (C6-oxidase) (OsDWARF) (Dwarf protein) - Oryza sativa (Rice) & (reliability: 546.0) & (original description: no original description)"
Expression Profile
Attention: This gene has low abundance.
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Pseudotsuga release: PSME_00038016-RA | |
| Cluster | HCCA clusters: Cluster_226 | |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
| 120985 | No alias | cytochrome P450, family 707, subfamily A, polypeptide 4 | 0.02 | Orthogroups_2024-Update | |
| Bradi1g15030 | No alias | brassinosteroid-6-oxidase 2 | 0.02 | Orthogroups_2024-Update | |
| Brara.K01317.1 | No alias | 3-epi-6-deoxocathasterone 23-monooxygenase & EC_1.14... | 0.03 | Orthogroups_2024-Update | |
| Glyma.02G287300 | No alias | cytochrome P450, family 718 | 0.02 | Orthogroups_2024-Update | |
| Glyma.07G010700 | No alias | cytochrome P450, family 90, subfamily D, polypeptide 1 | 0.03 | Orthogroups_2024-Update | |
| LOC_Os01g10040 | No alias | cytochrome P450, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| Mp7g03050.1 | No alias | Taxane 13-alpha-hydroxylase OS=Taxus cuspidata... | 0.02 | Orthogroups_2024-Update | |
| PSME_00039956-RA | No alias | "(at5g36110 : 431.0) member of CYP716A; ""cytochrome... | 0.04 | Orthogroups_2024-Update | |
| Seita.9G021400.1 | No alias | EC_1.14 oxidoreductase acting on paired donor with... | 0.03 | Orthogroups_2024-Update | |
| Sopen04g027100 | No alias | Cytochrome P450 | 0.03 | Orthogroups_2024-Update | |
| Sopen08g001650 | No alias | Cytochrome P450 | 0.02 | Orthogroups_2024-Update | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003824 | catalytic activity | None | Extended |
| MF | GO:0005488 | binding | None | Extended |
| MF | GO:0005506 | iron ion binding | IEA | InterProScan predictions |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0008152 | metabolic process | None | Extended |
| MF | GO:0016491 | oxidoreductase activity | None | Extended |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEA | InterProScan predictions |
| MF | GO:0020037 | heme binding | IEA | InterProScan predictions |
| MF | GO:0043167 | ion binding | None | Extended |
| MF | GO:0043169 | cation binding | None | Extended |
| MF | GO:0046872 | metal ion binding | None | Extended |
| MF | GO:0046906 | tetrapyrrole binding | None | Extended |
| MF | GO:0046914 | transition metal ion binding | None | Extended |
| MF | GO:0048037 | cofactor binding | None | Extended |
| BP | GO:0055114 | oxidation-reduction process | IEA | InterProScan predictions |
| MF | GO:0097159 | organic cyclic compound binding | None | Extended |
| MF | GO:1901363 | heterocyclic compound binding | None | Extended |
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0004601 | peroxidase activity | IEP | Predicted GO |
| BP | GO:0006950 | response to stress | IEP | Predicted GO |
| BP | GO:0006979 | response to oxidative stress | IEP | Predicted GO |
| MF | GO:0008061 | chitin binding | IEP | Predicted GO |
| MF | GO:0016209 | antioxidant activity | IEP | Predicted GO |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Predicted GO |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Predicted GO |
| MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Predicted GO |
| BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
| IPR001128 | Cyt_P450 | 40 | 451 |
