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  5. PSME_00038087-RA

PSME_00038087-RA


Description : (at4g21120 : 709.0) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system.; amino acid transporter 1 (AAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, cationic amino acid transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: basic amino acid transport, L-arginine import, L-glutamate import; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cationic amino acid transporter (InterPro:IPR015606), Amino acid/polyamine transporter I (InterPro:IPR002293), Cationic amino acid transport permease (InterPro:IPR004755), Amino acid permease domain (InterPro:IPR004841); BEST Arabidopsis thaliana protein match is: cationic amino acid transporter 5 (TAIR:AT2G34960.1); Has 31468 Blast hits to 31317 proteins in 2259 species: Archae - 510; Bacteria - 25893; Metazoa - 1955; Fungi - 1722; Plants - 342; Viruses - 0; Other Eukaryotes - 1046 (source: NCBI BLink). & (reliability: 1418.0) & (original description: no original description)


Gene families : OG_42_0000938 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000938_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00038087-RA
Cluster HCCA clusters: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
A4A49_34565 No alias cationic amino acid transporter 1 0.02 Orthogroups_2024-Update
At1g17120 No alias Cationic amino acid transporter 8, vacuolar... 0.04 Orthogroups_2024-Update
Glyma.08G129600 No alias amino acid transporter 1 0.02 Orthogroups_2024-Update
Kfl00089_0090 kfl00089_0090_v1.1 (at4g21120 : 482.0) Encodes a member of the cationic... 0.01 Orthogroups_2024-Update
PSME_00024576-RA No alias (at4g21120 : 694.0) Encodes a member of the cationic... 0.04 Orthogroups_2024-Update
PSME_00045812-RA No alias (at4g21120 : 684.0) Encodes a member of the cationic... 0.03 Orthogroups_2024-Update
PSME_00055966-RA No alias (at4g21120 : 676.0) Encodes a member of the cationic... 0.05 Orthogroups_2024-Update
Solyc02g081850 No alias Cationic amino acid transporter (AHRD V3.3 *** G7INC3_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR029485 CAT_C 568 618
IPR002293 AA/rel_permease1 110 499
No external refs found!