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  5. PSME_00038099-RA

PSME_00038099-RA


Description : (at2g02990 : 167.0) member of the ribonuclease T2 family, responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid.; ribonuclease 1 (RNS1); FUNCTIONS IN: ribonuclease activity, endoribonuclease activity; INVOLVED IN: cellular response to phosphate starvation, aging, response to wounding, anthocyanin biosynthetic process; LOCATED IN: extracellular region, cell wall, plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Ribonuclease T2 (InterPro:IPR001568), Ribonuclease T2, active site (InterPro:IPR018188); BEST Arabidopsis thaliana protein match is: Ribonuclease T2 family protein (TAIR:AT1G14220.1); Has 2632 Blast hits to 2631 proteins in 514 species: Archae - 0; Bacteria - 441; Metazoa - 304; Fungi - 244; Plants - 1533; Viruses - 7; Other Eukaryotes - 103 (source: NCBI BLink). & (p83618|rn28_pangi : 82.8) Ribonuclease-like storage protein precursor (Root 28 kDa major protein) - Panax ginseng (Korean ginseng) & (reliability: 334.0) & (original description: no original description)


Gene families : OG_42_0000815 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000815_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00038099-RA
Cluster HCCA clusters: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
A4A49_20359 No alias intracellular ribonuclease lx 0.03 Orthogroups_2024-Update
At1g26820 No alias Ribonuclease 3 [Source:UniProtKB/Swiss-Prot;Acc:P42815] 0.02 Orthogroups_2024-Update
Brara.B03140.1 No alias T2-type RNase *(RNS) 0.03 Orthogroups_2024-Update
Glyma.12G115100 No alias ribonuclease 3 0.02 Orthogroups_2024-Update
MA_10433186g0010 No alias (at2g02990 : 297.0) member of the ribonuclease T2... 0.03 Orthogroups_2024-Update
MA_10433186g0020 No alias (at2g02990 : 219.0) member of the ribonuclease T2... 0.04 Orthogroups_2024-Update
PSME_00038098-RA No alias (at2g02990 : 241.0) member of the ribonuclease T2... 0.03 Orthogroups_2024-Update
PSME_00046521-RA No alias (at1g26820 : 261.0) Encodes ribonuclease RNS3.;... 0.05 Orthogroups_2024-Update
PSME_00051464-RA No alias (at1g26820 : 132.0) Encodes ribonuclease RNS3.;... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0033897 ribonuclease T2 activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR001568 RNase_T2-like 3 125
No external refs found!