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  5. PSME_00038104-RA

PSME_00038104-RA


Description : (at1g29800 : 91.7) RING/FYVE/PHD-type zinc finger family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Zinc finger, FYVE-related (InterPro:IPR017455), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Ysc84 actin-binding domain (InterPro:IPR007461); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD-type zinc finger family protein (TAIR:AT3G43230.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 183.4) & (original description: no original description)


Gene families : OG_42_0001621 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001621_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00038104-RA

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G088960.1 No alias Unknown function 0.04 Orthogroups_2024-Update
MA_10434669g0010 No alias (at1g29800 : 497.0) RING/FYVE/PHD-type zinc finger... 0.02 Orthogroups_2024-Update
PSME_00003726-RA No alias (at3g43230 : 513.0) RING/FYVE/PHD-type zinc finger... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007461 Ysc84_actin-binding 40 108
No external refs found!