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  5. PSME_00038188-RA

PSME_00038188-RA


Description : (at2g28150 : 216.0) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF966 (InterPro:IPR010369), Uncharacterised conserved protein UCP031043 (InterPro:IPR021182); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF966) (TAIR:AT5G59790.1); Has 2510 Blast hits to 686 proteins in 184 species: Archae - 0; Bacteria - 433; Metazoa - 315; Fungi - 216; Plants - 186; Viruses - 4; Other Eukaryotes - 1356 (source: NCBI BLink). & (reliability: 432.0) & (original description: no original description)


Gene families : OG_42_0000906 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000906_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00038188-RA
Cluster HCCA clusters: Cluster_378

Target Alias Description ECC score Gene Family Method Actions
A4A49_00112 No alias protein upstream of flc 0.03 Orthogroups_2024-Update
HORVU3Hr1G116730.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Potri.001G235700 No alias Domain of unknown function (DUF966) 0.03 Orthogroups_2024-Update
Potri.009G027500 No alias Domain of unknown function (DUF966) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
InterPro domains Description Start Stop
IPR010369 DUF966 401 463
IPR010369 DUF966 41 376
No external refs found!