PSME_00038370-RA

Description : (o04887|pme2_citsi : 476.0) Pectinesterase-2 precursor (EC 3.1.1.11) (Pectin methylesterase) (PE) - Citrus sinensis (Sweet orange) & (at2g45220 : 458.0) Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: membrane, plant-type cell wall; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding/sugar hydrolysis domain (InterPro:IPR006633), Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT5G51490.1); Has 2773 Blast hits to 2723 proteins in 340 species: Archae - 10; Bacteria - 616; Metazoa - 1; Fungi - 203; Plants - 1907; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 902.0) & (original description: no original description)

Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00038370-RA
Cluster	HCCA clusters: Cluster_202

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03834	No alias	putative pectinesterasepectinesterase inhibitor 61	0.03	Orthogroups_2024-Update
A4A49_30247	No alias	putative pectinesterasepectinesterase inhibitor 28	0.03	Orthogroups_2024-Update
At1g53830	No alias	Pectinesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42534]	0.02	Orthogroups_2024-Update
Bradi2g52140	No alias	methylesterase PCR A	0.03	Orthogroups_2024-Update
Brara.E00332.1	No alias	EC_3.1 hydrolase acting on ester bond & pectin methylesterase	0.03	Orthogroups_2024-Update
Brara.F01763.1	No alias	EC_3.1 hydrolase acting on ester bond & pectin methylesterase	0.03	Orthogroups_2024-Update
Brara.I03256.1	No alias	EC_3.1 hydrolase acting on ester bond & pectin methylesterase	0.03	Orthogroups_2024-Update
Brara.I05209.1	No alias	EC_3.1 hydrolase acting on ester bond & pectin methylesterase	0.02	Orthogroups_2024-Update
GRMZM2G025182	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.02	Orthogroups_2024-Update
PSME_00020069-RA	No alias	(p83948\|pme3_citsi : 450.0) Pectinesterase-3 precursor...	0.04	Orthogroups_2024-Update
PSME_00039059-RA	No alias	(o04886\|pme1_citsi : 432.0) Pectinesterase-1 precursor...	0.04	Orthogroups_2024-Update
PSME_00039060-RA	No alias	(o04886\|pme1_citsi : 432.0) Pectinesterase-1 precursor...	0.04	Orthogroups_2024-Update
Seita.3G376400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.5G450500.1	No alias	EC_3.1 hydrolase acting on ester bond & pectin methylesterase	0.02	Orthogroups_2024-Update
Sobic.002G210700.1	No alias	EC_3.1 hydrolase acting on ester bond & pectin methylesterase	0.02	Orthogroups_2024-Update
Sobic.010G071300.1	No alias	EC_3.1 hydrolase acting on ester bond & pectin methylesterase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	InterProScan predictions
BP	GO:0042545	cell wall modification	IEA	InterProScan predictions
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	Predicted GO
MF	GO:0004519	endonuclease activity	IEP	Predicted GO
MF	GO:0004521	endoribonuclease activity	IEP	Predicted GO
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Predicted GO
MF	GO:0004540	ribonuclease activity	IEP	Predicted GO
MF	GO:0004664	prephenate dehydratase activity	IEP	Predicted GO
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Predicted GO
BP	GO:0009094	L-phenylalanine biosynthetic process	IEP	Predicted GO
BP	GO:0009095	aromatic amino acid family biosynthetic process, prephenate pathway	IEP	Predicted GO
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predicted GO
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predicted GO
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Predicted GO
BP	GO:1902223	erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	257	553
IPR006501	Pectinesterase_inhib_dom	59	203

External Links

No external refs found!

PSME_00038370-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation