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  5. PSME_00038432-RA

PSME_00038432-RA


Description : (at3g43860 : 508.0) glycosyl hydrolase 9A4 (GH9A4); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B13 (TAIR:AT4G02290.1); Has 1796 Blast hits to 1785 proteins in 262 species: Archae - 2; Bacteria - 633; Metazoa - 188; Fungi - 19; Plants - 915; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink). & (q6k7g9|gun8_orysa : 477.0) Endoglucanase 8 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 8) - Oryza sativa (Rice) & (reliability: 1016.0) & (original description: no original description)


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00038432-RA
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Bradi1g35220 No alias glycosyl hydrolase 9B5 0.02 Orthogroups_2024-Update
Bradi3g57190 No alias glycosyl hydrolase 9A4 0.03 Orthogroups_2024-Update
Bradi3g59810 No alias glycosyl hydrolase 9B8 0.02 Orthogroups_2024-Update
Brara.F01424.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G048165 No alias glycosyl hydrolase 9B18 0.02 Orthogroups_2024-Update
GRMZM2G147422 No alias glycosyl hydrolase 9B7 0.03 Orthogroups_2024-Update
GRMZM2G538064 No alias glycosyl hydrolase 9A4 0.03 Orthogroups_2024-Update
Glyma.02G049000 No alias glycosyl hydrolase 9B5 0.03 Orthogroups_2024-Update
Glyma.02G269400 No alias glycosyl hydrolase 9B8 0.03 Orthogroups_2024-Update
HORVU5Hr1G098710.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_195523g0010 No alias (at3g43860 : 298.0) glycosyl hydrolase 9A4 (GH9A4);... 0.03 Orthogroups_2024-Update
Mp1g20540.1 No alias Endoglucanase 19 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Potri.002G225200 No alias glycosyl hydrolase 9B8 0.03 Orthogroups_2024-Update
Potri.003G139600 No alias glycosyl hydrolase 9C2 0.03 Orthogroups_2024-Update
Potri.009G123900 No alias glycosyl hydrolase 9B18 0.03 Orthogroups_2024-Update
Potri.014G126900 No alias glycosyl hydrolase 9B13 0.03 Orthogroups_2024-Update
Sobic.002G276600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc09g010210 No alias endo-1,4-beta-glucanase precursor (Cel2) 0.04 Orthogroups_2024-Update
Sopen01g052490 No alias Glycosyl hydrolase family 9 0.03 Orthogroups_2024-Update
Sopen09g030130 No alias Glycosyl hydrolase family 9 0.02 Orthogroups_2024-Update
Sopen11g018340 No alias Glycosyl hydrolase family 9 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 34 482
No external refs found!