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  5. PSME_00038516-RA

PSME_00038516-RA


Description : (at5g01750 : 171.0) Protein of unknown function (DUF567); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G11740.1); Has 468 Blast hits to 466 proteins in 44 species: Archae - 0; Bacteria - 29; Metazoa - 0; Fungi - 27; Plants - 412; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 342.0) & (original description: no original description)


Gene families : OG_42_0000351 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000351_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00038516-RA
Cluster HCCA clusters: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Mp2g03360.1 No alias Protein LURP-one-related 10 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
PSME_00029425-RA No alias (at5g01750 : 169.0) Protein of unknown function... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007612 LOR 26 200
No external refs found!