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Description : (at2g16880 : 429.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: rna processing factor 2 (TAIR:AT1G62670.1); Has 61418 Blast hits to 15263 proteins in 321 species: Archae - 6; Bacteria - 91; Metazoa - 1247; Fungi - 1283; Plants - 56613; Viruses - 0; Other Eukaryotes - 2178 (source: NCBI BLink). & (q76c99|rf1_orysa : 332.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 858.0) & (original description: no original description)
Gene families : OG_42_0022217 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00038669-RA | |
| Cluster | HCCA clusters: Cluster_118 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003743 | translation initiation factor activity | IEP | Predicted GO |
| MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
| MF | GO:0004620 | phospholipase activity | IEP | Predicted GO |
| BP | GO:0006413 | translational initiation | IEP | Predicted GO |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Predicted GO |
| MF | GO:0010181 | FMN binding | IEP | Predicted GO |
| MF | GO:0016298 | lipase activity | IEP | Predicted GO |
| CC | GO:0016459 | myosin complex | IEP | Predicted GO |
| CC | GO:0044430 | cytoskeletal part | IEP | Predicted GO |
| MF | GO:0050290 | sphingomyelin phosphodiesterase D activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 673 | 722 |
| IPR002885 | Pentatricopeptide_repeat | 155 | 195 |
| IPR002885 | Pentatricopeptide_repeat | 743 | 791 |
| IPR002885 | Pentatricopeptide_repeat | 498 | 547 |
| IPR002885 | Pentatricopeptide_repeat | 357 | 406 |
| IPR002885 | Pentatricopeptide_repeat | 568 | 616 |
| IPR002885 | Pentatricopeptide_repeat | 252 | 301 |
| IPR002885 | Pentatricopeptide_repeat | 428 | 477 |
| IPR002885 | Pentatricopeptide_repeat | 100 | 123 |
| IPR002885 | Pentatricopeptide_repeat | 637 | 666 |
| IPR002885 | Pentatricopeptide_repeat | 320 | 350 |
| IPR002885 | Pentatricopeptide_repeat | 214 | 245 |
| No external refs found! |