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PSME_00038683-RA


Description : (at1g60390 : 484.0) polygalacturonase 1 (PG1); FUNCTIONS IN: polygalacturonase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: polygalacturonase 2 (TAIR:AT1G70370.2); Has 3094 Blast hits to 2364 proteins in 384 species: Archae - 8; Bacteria - 697; Metazoa - 473; Fungi - 328; Plants - 614; Viruses - 4; Other Eukaryotes - 970 (source: NCBI BLink). & (reliability: 968.0) & (original description: no original description)


Gene families : OG_42_0001780 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001780_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00038683-RA
Cluster HCCA clusters: Cluster_8


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004873 BURP_dom 412 636
No external refs found!