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  5. PSME_00038789-RA

PSME_00038789-RA


Description : (at1g69550 : 138.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 276.0) & (original description: no original description)


Gene families : OG_42_0000607 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00038789-RA
Cluster HCCA clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
MA_10245438g0010 No alias (at1g69550 : 134.0) disease resistance protein... 0.05 Orthogroups_2024-Update
MA_10374742g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_10429550g0010 No alias (at1g69550 : 112.0) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_10433431g0020 No alias (at1g69550 : 123.0) disease resistance protein... 0.04 Orthogroups_2024-Update
MA_10437031g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_6125650g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_6154g0010 No alias (at1g69550 : 104.0) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_7670414g0010 No alias (at1g69550 : 195.0) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_913482g0010 No alias (at1g69550 : 85.9) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_9403319g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00003863-RA No alias (at2g14080 : 112.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00012314-RA No alias (at1g69550 : 176.0) disease resistance protein... 0.08 Orthogroups_2024-Update
PSME_00012637-RA No alias (at1g69550 : 191.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00014666-RA No alias (at1g69550 : 257.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00022892-RA No alias (at1g69550 : 93.6) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00023467-RA No alias (at1g69550 : 233.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00025149-RA No alias (at1g69550 : 231.0) disease resistance protein... 0.07 Orthogroups_2024-Update
PSME_00029256-RA No alias (at1g69550 : 97.4) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00031155-RA No alias (at1g69550 : 336.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00035348-RA No alias (at1g69550 : 133.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00038511-RA No alias (at1g69550 : 117.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00039413-RA No alias (at1g69550 : 213.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00043433-RA No alias (at1g69550 : 248.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00052649-RA No alias (at1g69550 : 417.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00054818-RA No alias (at1g69550 : 181.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00055013-RA No alias (at1g69550 : 137.0) disease resistance protein... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003883 CTP synthase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!