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  5. PSME_00038810-RA

PSME_00038810-RA


Description : (o49813|olee1_betve : 94.4) Olee1-like protein precursor - Betula verrucosa (White birch) (Betula pendula) & (at4g08685 : 90.1) Encodes a protein, expressed in leaves, with similarity to pollen allergens.; SAH7; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT1G78040.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 180.2) & (original description: no original description)


Gene families : OG_42_0000785 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000785_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00038810-RA
Cluster HCCA clusters: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Bradi3g24010 No alias Pollen Ole e 1 allergen and extensin family protein 0.02 Orthogroups_2024-Update
Glyma.15G082300 No alias Pollen Ole e 1 allergen and extensin family protein 0.03 Orthogroups_2024-Update
PSME_00032980-RA No alias (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00038809-RA No alias (o49813|olee1_betve : 87.0) Olee1-like protein precursor... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!