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  5. PSME_00038837-RA

PSME_00038837-RA


Description : (at1g12300 : 348.0) Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G12775.1); Has 69404 Blast hits to 15469 proteins in 318 species: Archae - 6; Bacteria - 74; Metazoa - 1057; Fungi - 1243; Plants - 64555; Viruses - 0; Other Eukaryotes - 2469 (source: NCBI BLink). & (q76c99|rf1_orysa : 306.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 628.0) & (original description: no original description)


Gene families : OG_42_0127889 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00038837-RA
Cluster HCCA clusters: Cluster_242


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 94 123
IPR002885 Pentatricopeptide_repeat 394 425
IPR002885 Pentatricopeptide_repeat 291 319
IPR002885 Pentatricopeptide_repeat 129 150
IPR002885 Pentatricopeptide_repeat 157 206
IPR002885 Pentatricopeptide_repeat 432 481
IPR002885 Pentatricopeptide_repeat 224 273
IPR002885 Pentatricopeptide_repeat 329 378
IPR002885 Pentatricopeptide_repeat 35 56
IPR002885 Pentatricopeptide_repeat 65 92
No external refs found!