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  5. PSME_00038856-RA

PSME_00038856-RA


Description : (at2g46740 : 358.0) D-arabinono-1,4-lactone oxidase family protein; FUNCTIONS IN: oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity; INVOLVED IN: oxidation reduction; LOCATED IN: cell wall; EXPRESSED IN: leaf apex, root; CONTAINS InterPro DOMAIN/s: D-arabinono-1,4-lactone oxidase (InterPro:IPR007173), FAD-binding, type 2 (InterPro:IPR016166), Plant-specific FAD-dependent oxidoreductase (InterPro:IPR010030), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: D-arabinono-1,4-lactone oxidase family protein (TAIR:AT2G46750.1); Has 2786 Blast hits to 2671 proteins in 804 species: Archae - 14; Bacteria - 1897; Metazoa - 120; Fungi - 214; Plants - 254; Viruses - 0; Other Eukaryotes - 287 (source: NCBI BLink). & (reliability: 716.0) & (original description: no original description)


Gene families : OG_42_0000298 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000298_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00038856-RA
Cluster HCCA clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Bradi3g22060 No alias D-arabinono-1,4-lactone oxidase family protein 0.03 Orthogroups_2024-Update
Glyma.19G259400 No alias D-arabinono-1,4-lactone oxidase family protein 0.02 Orthogroups_2024-Update
PSME_00017349-RA No alias (at2g46750 : 423.0) D-arabinono-1,4-lactone oxidase... 0.04 Orthogroups_2024-Update
PSME_00029638-RA No alias (at2g46760 : 632.0) D-arabinono-1,4-lactone oxidase... 0.01 Orthogroups_2024-Update
PSME_00031524-RA No alias (at2g46750 : 423.0) D-arabinono-1,4-lactone oxidase... 0.03 Orthogroups_2024-Update
PSME_00046504-RA No alias (at1g32300 : 282.0) D-arabinono-1,4-lactone oxidase... 0.04 Orthogroups_2024-Update
PSME_00047113-RA No alias (at1g32300 : 350.0) D-arabinono-1,4-lactone oxidase... 0.04 Orthogroups_2024-Update
PSME_00050929-RA No alias (at2g46760 : 641.0) D-arabinono-1,4-lactone oxidase... 0.04 Orthogroups_2024-Update
Potri.002G178300 No alias D-arabinono-1,4-lactone oxidase family protein 0.02 Orthogroups_2024-Update
Seita.6G087600.1 No alias L-gulono-1,4-lactone oxidase *(GULLO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!