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  5. PSME_00038890-RA

PSME_00038890-RA


Description : (p31110|tlp_orysa : 221.0) Thaumatin-like protein precursor - Oryza sativa (Rice) & (at4g11650 : 161.0) osmotin-like protein; osmotin 34 (OSM34); INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress, defense response to bacterium, incompatible interaction, response to other organism; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Thaumatin, conserved site (InterPro:IPR017949), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: Pathogenesis-related thaumatin superfamily protein (TAIR:AT1G75050.1); Has 1614 Blast hits to 1589 proteins in 184 species: Archae - 0; Bacteria - 39; Metazoa - 52; Fungi - 83; Plants - 1427; Viruses - 3; Other Eukaryotes - 10 (source: NCBI BLink). & (reliability: 322.0) & (original description: no original description)


Gene families : OG_42_0002839 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002839_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00038890-RA
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
PSME_00034789-RA No alias (p31110|tlp_orysa : 226.0) Thaumatin-like protein... 0.05 Orthogroups_2024-Update
PSME_00037959-RA No alias (p31110|tlp_orysa : 207.0) Thaumatin-like protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031262 Ndc80 complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001938 Thaumatin 36 154
No external refs found!