1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00038910-RA

PSME_00038910-RA


Description : (at1g80120 : 132.0) Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT3G15810.1); Has 439 Blast hits to 438 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 9; Plants - 430; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 264.0) & (original description: no original description)


Gene families : OG_42_0000492 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000492_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00038910-RA
Cluster HCCA clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
A4A49_36021 No alias protein lurp-one-related 12 0.04 Orthogroups_2024-Update
Brara.B02524.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C01957.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.C01958.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E00671.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.08G212600 No alias Protein of unknown function (DUF567) 0.03 Orthogroups_2024-Update
Glyma.15G007500 No alias Protein of unknown function (DUF567) 0.04 Orthogroups_2024-Update
HORVU1Hr1G069180.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os05g43460 No alias DUF567 domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10428043g0010 No alias (at2g38640 : 133.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
PSME_00003956-RA No alias (at1g80120 : 145.0) Protein of unknown function... 0.02 Orthogroups_2024-Update
Potri.006G067000 No alias Protein of unknown function (DUF567) 0.03 Orthogroups_2024-Update
Seita.3G184100.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR007612 LOR 17 198
No external refs found!