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  5. PSME_00038966-RA

PSME_00038966-RA


Description : (original description: no original description)


Gene families : OG_42_0001200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001200_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00038966-RA
Cluster HCCA clusters: Cluster_530

Target Alias Description ECC score Gene Family Method Actions
PSME_00040749-RA No alias (original description: no original description) 0.01 Orthogroups_2024-Update
PSME_00043932-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00044232-RA No alias (original description: no original description) 0.01 Orthogroups_2024-Update
PSME_00044498-RA No alias (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00045804-RA No alias (original description: no original description) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!