PSME_00039098-RA

Description : (at3g01970 : 112.0) member of WRKY Transcription Factor; Group I; WRKY DNA-binding protein 45 (WRKY45); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 75 (TAIR:AT5G13080.1); Has 3497 Blast hits to 3049 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3482; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description)

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00039098-RA
Cluster	HCCA clusters: Cluster_29

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g11170	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
Bradi3g34850	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Brara.C01543.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU3Hr1G059220.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU3Hr1G071750.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
MA_114793g0010	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
PSME_00052260-RA	No alias	(at5g26170 : 117.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
Seita.3G108500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.3G143400.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.8G012800.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G006600.1	No alias	WRKY-type transcription factor	0.01	Orthogroups_2024-Update
Sobic.001G083000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G084000.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G068900.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.009G092100.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.009G234100.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.010G209200.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Predicted GO
MF	GO:0004518	nuclease activity	IEP	Predicted GO
MF	GO:0004519	endonuclease activity	IEP	Predicted GO
BP	GO:0006308	DNA catabolic process	IEP	Predicted GO
BP	GO:0006457	protein folding	IEP	Predicted GO
MF	GO:0008374	O-acyltransferase activity	IEP	Predicted GO
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Predicted GO
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Predicted GO
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Predicted GO
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predicted GO
MF	GO:0051082	unfolded protein binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	176	233

External Links

No external refs found!

PSME_00039098-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation