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  5. PSME_00039180-RA

PSME_00039180-RA


Description : (q6f4f5|c724b_orysa : 458.0) Cytochrome P450 724B1 (EC 1.14.-.-) (OsDWARF11) (Dwarf protein 11) - Oryza sativa (Rice) & (at3g50660 : 317.0) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.; DWARF 4 (DWF4); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: Cytochrome P450 superfamily protein (TAIR:AT5G05690.1); Has 31120 Blast hits to 31036 proteins in 1650 species: Archae - 61; Bacteria - 5303; Metazoa - 10591; Fungi - 5722; Plants - 7996; Viruses - 3; Other Eukaryotes - 1444 (source: NCBI BLink). & (reliability: 634.0) & (original description: no original description)


Gene families : OG_42_0000020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00039180-RA
Cluster HCCA clusters: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
At3g30290 No alias Cytochrome P450, family 702, subfamily A, polypeptide 8... 0.03 Orthogroups_2024-Update
At4g36380 No alias ROT3 [Source:UniProtKB/TrEMBL;Acc:A0A178V4B0] 0.02 Orthogroups_2024-Update
Glyma.01G153300 No alias cytochrome P450, family 707, subfamily A, polypeptide 1 0.02 Orthogroups_2024-Update
Glyma.01G175500 No alias Cytochrome P450 superfamily protein 0.02 Orthogroups_2024-Update
PSME_00006042-RA No alias "(at5g36110 : 93.2) member of CYP716A; ""cytochrome... 0.04 Orthogroups_2024-Update
PSME_00025584-RA No alias "(at4g19230 : 145.0) Encodes a protein with ABA... 0.04 Orthogroups_2024-Update
PSME_00036524-RA No alias "(at5g45340 : 604.0) Encodes a protein with ABA... 0.02 Orthogroups_2024-Update
Potri.002G069600 No alias cytochrome P450, family 722, subfamily A, polypeptide 1 0.02 Orthogroups_2024-Update
Seita.3G114000.1 No alias 3-epi-6-deoxocathasterone 23-monooxygenase & EC_1.14... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 37 302
IPR001128 Cyt_P450 309 415
No external refs found!