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  5. PSME_00039228-RA

PSME_00039228-RA


Description : (at1g66150 : 723.0) receptor-like transmembrane kinase I (TMK1); transmembrane kinase 1 (TMK1); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity; INVOLVED IN: signal transduction; LOCATED IN: extracellular region, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT2G01820.1); Has 173049 Blast hits to 137802 proteins in 4904 species: Archae - 168; Bacteria - 18898; Metazoa - 54853; Fungi - 11361; Plants - 66018; Viruses - 436; Other Eukaryotes - 21315 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 212.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 1446.0) & (original description: no original description)


Gene families : OG_42_0000775 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000775_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00039228-RA
Cluster HCCA clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
102446 No alias transmembrane kinase 1 0.03 Orthogroups_2024-Update
268021 No alias transmembrane kinase 1 0.03 Orthogroups_2024-Update
A4A49_15819 No alias receptor protein kinase tmk1 0.04 Orthogroups_2024-Update
A4A49_40329 No alias receptor-like kinase tmk4 0.04 Orthogroups_2024-Update
Brara.F03452.1 No alias LRR-IX protein kinase & protein kinase *(TMK) & EC_2.7... 0.03 Orthogroups_2024-Update
Glyma.07G173100 No alias transmembrane kinase 1 0.03 Orthogroups_2024-Update
Glyma.18G003000 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Potri.001G217700 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Seita.9G115800.1 No alias LRR-IX protein kinase & protein kinase *(TMK) & EC_2.7... 0.02 Orthogroups_2024-Update
Sopen10g032420 No alias Protein tyrosine kinase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025875 Leu-rich_rpt_4 394 434
IPR013210 LRR_N_plant-typ 30 66
IPR013210 LRR_N_plant-typ 332 367
IPR001245 Ser-Thr/Tyr_kinase_cat_dom 612 788
No external refs found!