1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00039238-RA

PSME_00039238-RA


Description : (at3g51680 : 389.0) NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: cotyledon, root; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G26770.1); Has 119773 Blast hits to 119555 proteins in 3701 species: Archae - 1000; Bacteria - 77051; Metazoa - 6334; Fungi - 6742; Plants - 2947; Viruses - 5; Other Eukaryotes - 25694 (source: NCBI BLink). & (p50160|ts2_maize : 342.0) Sex determination protein tasselseed-2 - Zea mays (Maize) & (reliability: 778.0) & (original description: no original description)


Gene families : OG_42_0000111 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00039238-RA
Cluster HCCA clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
A4A49_10524 No alias xanthoxin dehydrogenase 0.02 Orthogroups_2024-Update
A4A49_10897 No alias xanthoxin dehydrogenase 0.02 Orthogroups_2024-Update
A4A49_61240 No alias momilactone a synthase 0.03 Orthogroups_2024-Update
At3g26760 No alias Alcohol dehydrogenase-like protein... 0.04 Orthogroups_2024-Update
At3g26770 No alias Alcohol dehydrogenase-like protein... 0.03 Orthogroups_2024-Update
At3g29260 No alias Short-chain dehydrogenase reductase 5... 0.05 Orthogroups_2024-Update
Bradi1g04320 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.06 Orthogroups_2024-Update
Bradi5g10757 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Brara.I00208.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G156739 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G113200 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Orthogroups_2024-Update
Glyma.03G222600 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Orthogroups_2024-Update
Glyma.06G190100 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G279800 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G151400 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G092900 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G197200 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G015140.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G015160.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G021500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G021540.3 No alias Unknown function 0.06 Orthogroups_2024-Update
LOC_Os07g46830 No alias sex determination protein tasselseed-2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g46840 No alias oxidoreductase, short chain dehydrogenase/reductase... 0.03 Orthogroups_2024-Update
MA_112182g0010 No alias (at3g51680 : 203.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
MA_14140g0010 No alias (at3g26770 : 304.0) NAD(P)-binding Rossmann-fold... 0.04 Orthogroups_2024-Update
MA_289156g0010 No alias (at3g51680 : 225.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
MA_7515994g0010 No alias (at3g51680 : 189.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
MA_92200g0020 No alias (at3g51680 : 242.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
Mp3g24690.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 Orthogroups_2024-Update
Mp3g24710.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Orthogroups_2024-Update
Mp5g00680.1 No alias Short-chain dehydrogenase reductase 3c OS=Arabidopsis... 0.02 Orthogroups_2024-Update
PSME_00006759-RA No alias (at3g51680 : 233.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
PSME_00046323-RA No alias (at3g51680 : 255.0) NAD(P)-binding Rossmann-fold... 0.04 Orthogroups_2024-Update
PSME_00047761-RA No alias (at3g51680 : 270.0) NAD(P)-binding Rossmann-fold... 0.03 Orthogroups_2024-Update
PSME_00054773-RA No alias (at3g51680 : 212.0) NAD(P)-binding Rossmann-fold... 0.04 Orthogroups_2024-Update
Potri.006G206800 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G115300 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 Orthogroups_2024-Update
Potri.015G065700 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Potri.016G073800 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Orthogroups_2024-Update
Seita.2G441800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G139100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G139200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.6G139300.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Seita.7G086700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.9G436000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G026300.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G123000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g073640 No alias alcohol dehydrogenase-3,Pfam:PF13561 0.03 Orthogroups_2024-Update
Solyc03g095970 No alias NAD(P)-binding Rossmann-fold superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc10g083170 No alias NAD(P)-binding Rossmann-fold superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc12g056610 No alias NAD(P)-binding Rossmann-fold superfamily protein (AHRD... 0.02 Orthogroups_2024-Update
Sopen04g027940 No alias short chain dehydrogenase 0.02 Orthogroups_2024-Update
Sopen12g029250 No alias Enoyl-(Acyl carrier protein) reductase 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!