Description : (at3g28345 : 1459.0) ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: shoot apex, inflorescence meristem, cotyledon, hypocotyl, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: P-glycoprotein 17 (TAIR:AT3G28380.1); Has 822177 Blast hits to 385706 proteins in 4160 species: Archae - 14477; Bacteria - 641696; Metazoa - 17642; Fungi - 12086; Plants - 9535; Viruses - 48; Other Eukaryotes - 126693 (source: NCBI BLink). & (q6yuu5|mdr_orysa : 1443.0) Putative multidrug resistance protein (P-glycoprotein) - Oryza sativa (Rice) & (reliability: 2918.0) & (original description: no original description)
Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00039275-RA | |
Cluster | HCCA clusters: Cluster_185 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
139408 | No alias | P-glycoprotein 20 | 0.04 | Orthogroups_2024-Update | |
AC233882.1_FG003 | No alias | P-glycoprotein 11 | 0.03 | Orthogroups_2024-Update | |
At3g28345 | No alias | ABC transporter B family member 15... | 0.03 | Orthogroups_2024-Update | |
Bradi2g48610 | No alias | ABC transporter family protein | 0.02 | Orthogroups_2024-Update | |
Brara.D00408.1 | No alias | subfamily ABCB transporter | 0.03 | Orthogroups_2024-Update | |
Glyma.02G094800 | No alias | P-glycoprotein 20 | 0.03 | Orthogroups_2024-Update | |
Glyma.06G139500 | No alias | ATP binding cassette subfamily B19 | 0.02 | Orthogroups_2024-Update | |
Glyma.10G137600 | No alias | ATP binding cassette subfamily B4 | 0.03 | Orthogroups_2024-Update | |
Glyma.13G063700 | No alias | ATP binding cassette subfamily B19 | 0.04 | Orthogroups_2024-Update | |
Glyma.19G021500 | No alias | ATP binding cassette subfamily B19 | 0.02 | Orthogroups_2024-Update | |
Glyma.19G184300 | No alias | ATP binding cassette subfamily B1 | 0.04 | Orthogroups_2024-Update | |
Kfl00461_0020 | kfl00461_0020_v1.1 | (at3g28860 : 1090.0) Belongs to the family of... | 0.01 | Orthogroups_2024-Update | |
MA_14136g0010 | No alias | (at2g39480 : 909.0) P-glycoprotein 6 (PGP6); FUNCTIONS... | 0.04 | Orthogroups_2024-Update | |
Mp2g06270.1 | No alias | subfamily ABCB transporter | 0.02 | Orthogroups_2024-Update | |
Mp2g11920.1 | No alias | subfamily ABCB transporter | 0.02 | Orthogroups_2024-Update | |
Pp1s29_108V6 | No alias | multidrug pheromone mdr abc transporter family | 0.02 | Orthogroups_2024-Update | |
Pp1s30_121V6 | No alias | multidrug pheromone mdr abc transporter family | 0.02 | Orthogroups_2024-Update | |
Pp1s30_122V6 | No alias | multidrug pheromone mdr abc transporter family | 0.01 | Orthogroups_2024-Update | |
evm.model.tig00000025.1 | No alias | (at2g47000 : 429.0) Multidrug resistance P-glycoprotein... | 0.01 | Orthogroups_2024-Update | |
evm.model.tig00000741.4 | No alias | (at3g62150 : 432.0) P-glycoprotein 21 (PGP21); FUNCTIONS... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
CC | GO:0016021 | integral component of membrane | IEA | InterProScan predictions |
MF | GO:0016887 | ATPase activity | IEA | InterProScan predictions |
MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEA | InterProScan predictions |
BP | GO:0055085 | transmembrane transport | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000139 | Golgi membrane | IEP | Predicted GO |
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Predicted GO |
MF | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | IEP | Predicted GO |
MF | GO:0004512 | inositol-3-phosphate synthase activity | IEP | Predicted GO |
MF | GO:0004673 | protein histidine kinase activity | IEP | Predicted GO |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Predicted GO |
MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
BP | GO:0006020 | inositol metabolic process | IEP | Predicted GO |
BP | GO:0006021 | inositol biosynthetic process | IEP | Predicted GO |
BP | GO:0006066 | alcohol metabolic process | IEP | Predicted GO |
BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Predicted GO |
BP | GO:0006790 | sulfur compound metabolic process | IEP | Predicted GO |
BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
BP | GO:0006888 | ER to Golgi vesicle-mediated transport | IEP | Predicted GO |
BP | GO:0007049 | cell cycle | IEP | Predicted GO |
BP | GO:0008104 | protein localization | IEP | Predicted GO |
MF | GO:0008536 | Ran GTPase binding | IEP | Predicted GO |
MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | Predicted GO |
MF | GO:0015020 | glucuronosyltransferase activity | IEP | Predicted GO |
BP | GO:0015031 | protein transport | IEP | Predicted GO |
MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | Predicted GO |
BP | GO:0015833 | peptide transport | IEP | Predicted GO |
BP | GO:0016192 | vesicle-mediated transport | IEP | Predicted GO |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predicted GO |
MF | GO:0016872 | intramolecular lyase activity | IEP | Predicted GO |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | Predicted GO |
BP | GO:0019751 | polyol metabolic process | IEP | Predicted GO |
CC | GO:0030117 | membrane coat | IEP | Predicted GO |
CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
CC | GO:0030126 | COPI vesicle coat | IEP | Predicted GO |
CC | GO:0030127 | COPII vesicle coat | IEP | Predicted GO |
MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Predicted GO |
MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
BP | GO:0042886 | amide transport | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
CC | GO:0044433 | cytoplasmic vesicle part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
BP | GO:0046165 | alcohol biosynthetic process | IEP | Predicted GO |
BP | GO:0046173 | polyol biosynthetic process | IEP | Predicted GO |
BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Predicted GO |
BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
BP | GO:0051321 | meiotic cell cycle | IEP | Predicted GO |
BP | GO:0051641 | cellular localization | IEP | Predicted GO |
BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | Predicted GO |
BP | GO:1901264 | carbohydrate derivative transport | IEP | Predicted GO |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Predicted GO |
MF | GO:1901681 | sulfur compound binding | IEP | Predicted GO |
No external refs found! |