1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00039446-RA

PSME_00039446-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000093 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00039446-RA
Cluster HCCA clusters: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
At3g62550 No alias Adenine nucleotide alpha hydrolases-like superfamily... 0.03 Orthogroups_2024-Update
Brara.G02777.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.13G331200 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os01g32780 No alias universal stress protein domain containing protein,... 0.03 Orthogroups_2024-Update
LOC_Os12g36630 No alias universal stress protein domain containing protein,... 0.02 Orthogroups_2024-Update
MA_57598g0010 No alias (at2g47710 : 91.7) Adenine nucleotide alpha... 0.04 Orthogroups_2024-Update
MA_720108g0010 No alias (at1g09740 : 105.0) Adenine nucleotide alpha... 0.07 Orthogroups_2024-Update
Mp7g10800.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
PSME_00004499-RA No alias (at1g09740 : 105.0) Adenine nucleotide alpha... 0.04 Orthogroups_2024-Update
PSME_00012338-RA No alias (at3g11930 : 92.8) Adenine nucleotide alpha... 0.04 Orthogroups_2024-Update
PSME_00015044-RA No alias (at3g53990 : 202.0) Adenine nucleotide alpha... 0.04 Orthogroups_2024-Update
PSME_00028954-RA No alias (at1g09740 : 93.6) Adenine nucleotide alpha... 0.07 Orthogroups_2024-Update
Sobic.003G051600.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0000278 mitotic cell cycle IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006016 UspA 59 118
No external refs found!